Click here to switch to the map view.

The map label for this gene is 33862494

Identifier: 33862494

GI number: 33862494

Start: 252196

End: 254196

Strand: Reverse

Name: 33862494

Synonym: PMT0221

Alternate gene names: NA

Gene position: 254196-252196 (Counterclockwise)

Preceding gene: 33862497

Following gene: 33862492

Centisome position: 10.54

GC content: 47.58

Gene sequence:

>2001_bases
ATGAAACCCATTTCCTTTCCCATCCTTGGAGGTGCATTGCTGGGCTCGCTGTCGGTCTTGCTTGCCTCCTGCGATGTCTC
CAGCATCACGGGTAATGCGTCAAGCTTCTCAGGGAGGGTTTCAGTATTAGGAAAGCCCGTCAGTGAAGCCAAGGTTTTGC
TCTGGCAGTCTTCCGCCAAGGATGGAGCGAAGAAAATCGTTGAGACCAAAACTTCTAAAGATGGGGCGTTCAAATTGTCC
ATACCCAGCAATAAGGATAAGGTTAGTTATTTAATTTCCGAAGGAGGAAGTATCGATGGACAAGATACTGACAACTTGAA
AATGCTCAGTGTTCTTGACTCCAATTCCAACAAGTCTGTCGTCATCAACGAACTGACATCCGTGGGATCAGTGTGGCCCA
ATGCTCAACTGATCAACGGAAATAAGATCAGTGGCAGCAAAACAGCTTTAGCCATTGGTTCGGGGCATGTAAGGCACCTA
GTCAATACAAGCAATGGCAAATATGGCGAAACACTTCTGAATGGCTTAAACCTGCCCAACTCCGAGACGATGGTTCGTCT
CAACGTTCTTTCCAACCTATTGGCCCTTTGTGGCAATAGCAATACAGCCGATGGCTGTAGTCAGTTACTCAATCTAACCA
ATTCAGATAACAGCCTCAACGCACTGATTTCTATCGCCAAAGAGCCGTGGGCAAAAGCCAGTGAGCTCTACAAACTGTTC
ACTCACCAATATCCACTCAACAAGGCAGAACAAATTCGAGAAGGCGCAACCCTTCCCTACCTGTTATTTGAACCGGAGAG
TTTTTCACTCTCGATCCGTCTAGAGGGTGGCGGCGCCATGGCACTCGGGAAAATGATGTTTGACGACAACGCCAATATGT
GGAGTGGTGCCAACTGGATGCCTGGTTCCCAATCTGGTGTCATCAACTCCATTGGAGGAGGGCTCACCAAGTTCAACTCC
AGCGGAGAAGCGCTCTCCCCATCACCTCAGGGATATAACGGACAAGGGCTAAATGGCGTGGGCTGGGGAACAGGAGTCTC
GAAAAATTATGCCTGGGTAGGCACTTTTAACAACAAGATCGGGGTCTTTGATCTTGAAGATGGCAAACCAGTTGGACCGG
CGACTGTTGATGGCGAGATCGGCCAACTGCAAGCAGTAACAACCGCCGCGAATGGAGATGTATGGATTGCAGATAACACC
AAGGATCACATGATTCGTTTCCCCGATGGTGACTATAAGAATGGCGAGCGATTAACAATCAAAGGATTACAAGCTCCTTT
CGGCATTGCTGTTGACCAGCAAAATAGAGTCTGGGTAACCAGCAGCTACAACAATAAACTCACCATCTTCCCTGGAGAAA
ACCCTGAGGCAGTGAAAACAATTGATATCGCTTTAGGAGCAAGAGGTGTGGCAATCGATTCCAAAGGCAATGCTTGGGTC
GCCCAGCAAACTGATTCAGCAACGCTAGTTTTACCTCCTGGGGTCAGCAAGGCACCTCCACGCCCAACAACAATCATGCA
GGAATTCATGCAAGGGCTTGAATATGCAAAAGCAAATCCGCAGCAAACAAGCTCTGGAATGATTGCACTGATCTCACCTG
ATTTGAAGATGATCAAATCAGACATTGCAAAAGGAGATGTCTATATTCCCTGGGGTGTAAGCATCGATGGCAATGACAAT
GTATGGGTTGCAAATCTTTTTGGTAGCAGTTTGATGCATATCTGTGGAGCCAATACATCAAATTGCCCTGAAGGTAAAAC
GACAGGTGATGTGATTCATGATTATCAGAGTGGTGTTATTCAAATGAACACCGATGTAATTATCGATGATGCCGGCAATA
TCTGGAGTGCGAACAACTGGTACGACGAAAATGCCGTCATCAACAAGAGCTATTTAGGTCGAACATCGACCTTTGCTGGT
GGTCAAGGATTCGTGGTGACCTACGGGGTCGCCGGTCCAGTCAAGAACCCTCTACTTGGTGTGGTTAGGCGTCCTGAATG
A

Upstream 100 bases:

>100_bases
AAACGGCACTTTCACAGGTCTATGACGTAACACCGAGAACTGAAGAGCTTGCACTACTTACGTACTACAACTAGAAGAAC
CAACAGAACGATCTGTAGCG

Downstream 100 bases:

>100_bases
AATCAAGGCCGCTCGCTATCACTTTTTGGCGAGCGGCAAAAGATTGTCAAACCTGGATCTGAATCCTGTTTAGAGCGCCA
AACTCTCTACCCGCGTCTCA

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; NHL Repeat Protein

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MKPISFPILGGALLGSLSVLLASCDVSSITGNASSFSGRVSVLGKPVSEAKVLLWQSSAKDGAKKIVETKTSKDGAFKLS
IPSNKDKVSYLISEGGSIDGQDTDNLKMLSVLDSNSNKSVVINELTSVGSVWPNAQLINGNKISGSKTALAIGSGHVRHL
VNTSNGKYGETLLNGLNLPNSETMVRLNVLSNLLALCGNSNTADGCSQLLNLTNSDNSLNALISIAKEPWAKASELYKLF
THQYPLNKAEQIREGATLPYLLFEPESFSLSIRLEGGGAMALGKMMFDDNANMWSGANWMPGSQSGVINSIGGGLTKFNS
SGEALSPSPQGYNGQGLNGVGWGTGVSKNYAWVGTFNNKIGVFDLEDGKPVGPATVDGEIGQLQAVTTAANGDVWIADNT
KDHMIRFPDGDYKNGERLTIKGLQAPFGIAVDQQNRVWVTSSYNNKLTIFPGENPEAVKTIDIALGARGVAIDSKGNAWV
AQQTDSATLVLPPGVSKAPPRPTTIMQEFMQGLEYAKANPQQTSSGMIALISPDLKMIKSDIAKGDVYIPWGVSIDGNDN
VWVANLFGSSLMHICGANTSNCPEGKTTGDVIHDYQSGVIQMNTDVIIDDAGNIWSANNWYDENAVINKSYLGRTSTFAG
GQGFVVTYGVAGPVKNPLLGVVRRPE

Sequences:

>Translated_666_residues
MKPISFPILGGALLGSLSVLLASCDVSSITGNASSFSGRVSVLGKPVSEAKVLLWQSSAKDGAKKIVETKTSKDGAFKLS
IPSNKDKVSYLISEGGSIDGQDTDNLKMLSVLDSNSNKSVVINELTSVGSVWPNAQLINGNKISGSKTALAIGSGHVRHL
VNTSNGKYGETLLNGLNLPNSETMVRLNVLSNLLALCGNSNTADGCSQLLNLTNSDNSLNALISIAKEPWAKASELYKLF
THQYPLNKAEQIREGATLPYLLFEPESFSLSIRLEGGGAMALGKMMFDDNANMWSGANWMPGSQSGVINSIGGGLTKFNS
SGEALSPSPQGYNGQGLNGVGWGTGVSKNYAWVGTFNNKIGVFDLEDGKPVGPATVDGEIGQLQAVTTAANGDVWIADNT
KDHMIRFPDGDYKNGERLTIKGLQAPFGIAVDQQNRVWVTSSYNNKLTIFPGENPEAVKTIDIALGARGVAIDSKGNAWV
AQQTDSATLVLPPGVSKAPPRPTTIMQEFMQGLEYAKANPQQTSSGMIALISPDLKMIKSDIAKGDVYIPWGVSIDGNDN
VWVANLFGSSLMHICGANTSNCPEGKTTGDVIHDYQSGVIQMNTDVIIDDAGNIWSANNWYDENAVINKSYLGRTSTFAG
GQGFVVTYGVAGPVKNPLLGVVRRPE
>Mature_666_residues
MKPISFPILGGALLGSLSVLLASCDVSSITGNASSFSGRVSVLGKPVSEAKVLLWQSSAKDGAKKIVETKTSKDGAFKLS
IPSNKDKVSYLISEGGSIDGQDTDNLKMLSVLDSNSNKSVVINELTSVGSVWPNAQLINGNKISGSKTALAIGSGHVRHL
VNTSNGKYGETLLNGLNLPNSETMVRLNVLSNLLALCGNSNTADGCSQLLNLTNSDNSLNALISIAKEPWAKASELYKLF
THQYPLNKAEQIREGATLPYLLFEPESFSLSIRLEGGGAMALGKMMFDDNANMWSGANWMPGSQSGVINSIGGGLTKFNS
SGEALSPSPQGYNGQGLNGVGWGTGVSKNYAWVGTFNNKIGVFDLEDGKPVGPATVDGEIGQLQAVTTAANGDVWIADNT
KDHMIRFPDGDYKNGERLTIKGLQAPFGIAVDQQNRVWVTSSYNNKLTIFPGENPEAVKTIDIALGARGVAIDSKGNAWV
AQQTDSATLVLPPGVSKAPPRPTTIMQEFMQGLEYAKANPQQTSSGMIALISPDLKMIKSDIAKGDVYIPWGVSIDGNDN
VWVANLFGSSLMHICGANTSNCPEGKTTGDVIHDYQSGVIQMNTDVIIDDAGNIWSANNWYDENAVINKSYLGRTSTFAG
GQGFVVTYGVAGPVKNPLLGVVRRPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70507; Mature: 70507

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPISFPILGGALLGSLSVLLASCDVSSITGNASSFSGRVSVLGKPVSEAKVLLWQSSAK
CCCCCCCEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCC
DGAKKIVETKTSKDGAFKLSIPSNKDKVSYLISEGGSIDGQDTDNLKMLSVLDSNSNKSV
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEE
VINELTSVGSVWPNAQLINGNKISGSKTALAIGSGHVRHLVNTSNGKYGETLLNGLNLPN
EEEEHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCC
SETMVRLNVLSNLLALCGNSNTADGCSQLLNLTNSDNSLNALISIAKEPWAKASELYKLF
CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
THQYPLNKAEQIREGATLPYLLFEPESFSLSIRLEGGGAMALGKMMFDDNANMWSGANWM
HCCCCCCHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
PGSQSGVINSIGGGLTKFNSSGEALSPSPQGYNGQGLNGVGWGTGVSKNYAWVGTFNNKI
CCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
GVFDLEDGKPVGPATVDGEIGQLQAVTTAANGDVWIADNTKDHMIRFPDGDYKNGERLTI
EEEECCCCCCCCCCEECCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCEEEE
KGLQAPFGIAVDQQNRVWVTSSYNNKLTIFPGENPEAVKTIDIALGARGVAIDSKGNAWV
EECCCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCEEE
AQQTDSATLVLPPGVSKAPPRPTTIMQEFMQGLEYAKANPQQTSSGMIALISPDLKMIKS
EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
DIAKGDVYIPWGVSIDGNDNVWVANLFGSSLMHICGANTSNCPEGKTTGDVIHDYQSGVI
HHCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEE
QMNTDVIIDDAGNIWSANNWYDENAVINKSYLGRTSTFAGGQGFVVTYGVAGPVKNPLLG
EECCCEEEECCCCEECCCCEECCCEEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEE
VVRRPE
EEECCC
>Mature Secondary Structure
MKPISFPILGGALLGSLSVLLASCDVSSITGNASSFSGRVSVLGKPVSEAKVLLWQSSAK
CCCCCCCEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCC
DGAKKIVETKTSKDGAFKLSIPSNKDKVSYLISEGGSIDGQDTDNLKMLSVLDSNSNKSV
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEE
VINELTSVGSVWPNAQLINGNKISGSKTALAIGSGHVRHLVNTSNGKYGETLLNGLNLPN
EEEEHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCC
SETMVRLNVLSNLLALCGNSNTADGCSQLLNLTNSDNSLNALISIAKEPWAKASELYKLF
CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
THQYPLNKAEQIREGATLPYLLFEPESFSLSIRLEGGGAMALGKMMFDDNANMWSGANWM
HCCCCCCHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
PGSQSGVINSIGGGLTKFNSSGEALSPSPQGYNGQGLNGVGWGTGVSKNYAWVGTFNNKI
CCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
GVFDLEDGKPVGPATVDGEIGQLQAVTTAANGDVWIADNTKDHMIRFPDGDYKNGERLTI
EEEECCCCCCCCCCEECCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCEEEE
KGLQAPFGIAVDQQNRVWVTSSYNNKLTIFPGENPEAVKTIDIALGARGVAIDSKGNAWV
EECCCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCEEE
AQQTDSATLVLPPGVSKAPPRPTTIMQEFMQGLEYAKANPQQTSSGMIALISPDLKMIKS
EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
DIAKGDVYIPWGVSIDGNDNVWVANLFGSSLMHICGANTSNCPEGKTTGDVIHDYQSGVI
HHCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEE
QMNTDVIIDDAGNIWSANNWYDENAVINKSYLGRTSTFAGGQGFVVTYGVAGPVKNPLLG
EECCCEEEECCCCEECCCCEECCCEEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEE
VVRRPE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA