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The map label for this gene is 33862327

Identifier: 33862327

GI number: 33862327

Start: 53847

End: 54410

Strand: Reverse

Name: 33862327

Synonym: PMT0054

Alternate gene names: NA

Gene position: 54410-53847 (Counterclockwise)

Preceding gene: 33862328

Following gene: 33862325

Centisome position: 2.26

GC content: 50.71

Gene sequence:

>564_bases
ATGAGCGCCTTCCTGCCAGAAACGCAAACCTACCTAATTGGCCTAATCGGTTTGCTCGCAATCGTGGCTGTCATCGTGGG
CAGTCAAGTTTTCAAGACTCAACGCGACGAACGGGCACTGATCCGACTTGAAAAAAGTGGAGCGGGCTCTTCCAAAGAGG
CATCCAAACTCTATGAACTGGCATCTGTACAGCTGCGTAAAAGGCTCTATCCCCAGGCCATAGCATCCCTTCGCAAAGCC
TTGAAGCAACTGACTGGTGAACCAGATGAAGCCAAAGCTCTGATCGAAAATGCCCTTGGGTTTGCACTCGCGGCTCAAAC
AGATTATTCATCTGCAGTTAGTCACTACCAGTCAGCCCTAAAAGCCAAGGCTGACTACCCCGTAGCACTCAACAACCTTG
CCTTTGCTAAAGAGCGCCTTGAGCAAGATGCTGAGGCCTACGAGCTGTATCAAAAGGTTCTCAGACTTGATCCCAAGAAC
AAGACAGCGCGCAAAAACCTCAAGCGATTGGCAAAAACACAACCAACAAACTCACCAGAGCCCGCGGATGGGCAAGGGTT
CTGA

Upstream 100 bases:

>100_bases
TTCAACCAGAAAAGCAGATGTTAAAAGTTCAAAGTCAATTCGACTACTTCCTCGATTTGACTGCAAATGCCAACTCATCA
CTAAGAACTGCCCCTAAACC

Downstream 100 bases:

>100_bases
TAAGGGTTCTGATGCCTGTACTGAACAGGAGCTGTTTAAGTCAAGCATGCCTCCCGTATTGGTAAGACGAGGTGCCTGCC
AACCCACCATTGTTAACTCC

Product: photosystem I assembly related protein Ycf37

Products: NA

Alternate protein names: Photosystem I Assembly Related Protein Ycf; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Photosystem I Assembly Protein Ycf; Photosystem I Assembly Protein; TPR Domain-Containing Protein; Photosystem I Assembly Related Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSAFLPETQTYLIGLIGLLAIVAVIVGSQVFKTQRDERALIRLEKSGAGSSKEASKLYELASVQLRKRLYPQAIASLRKA
LKQLTGEPDEAKALIENALGFALAAQTDYSSAVSHYQSALKAKADYPVALNNLAFAKERLEQDAEAYELYQKVLRLDPKN
KTARKNLKRLAKTQPTNSPEPADGQGF

Sequences:

>Translated_187_residues
MSAFLPETQTYLIGLIGLLAIVAVIVGSQVFKTQRDERALIRLEKSGAGSSKEASKLYELASVQLRKRLYPQAIASLRKA
LKQLTGEPDEAKALIENALGFALAAQTDYSSAVSHYQSALKAKADYPVALNNLAFAKERLEQDAEAYELYQKVLRLDPKN
KTARKNLKRLAKTQPTNSPEPADGQGF
>Mature_186_residues
SAFLPETQTYLIGLIGLLAIVAVIVGSQVFKTQRDERALIRLEKSGAGSSKEASKLYELASVQLRKRLYPQAIASLRKAL
KQLTGEPDEAKALIENALGFALAAQTDYSSAVSHYQSALKAKADYPVALNNLAFAKERLEQDAEAYELYQKVLRLDPKNK
TARKNLKRLAKTQPTNSPEPADGQGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20524; Mature: 20393

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFLPETQTYLIGLIGLLAIVAVIVGSQVFKTQRDERALIRLEKSGAGSSKEASKLYEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASVQLRKRLYPQAIASLRKALKQLTGEPDEAKALIENALGFALAAQTDYSSAVSHYQSAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KAKADYPVALNNLAFAKERLEQDAEAYELYQKVLRLDPKNKTARKNLKRLAKTQPTNSPE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
PADGQGF
CCCCCCC
>Mature Secondary Structure 
SAFLPETQTYLIGLIGLLAIVAVIVGSQVFKTQRDERALIRLEKSGAGSSKEASKLYEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASVQLRKRLYPQAIASLRKALKQLTGEPDEAKALIENALGFALAAQTDYSSAVSHYQSAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KAKADYPVALNNLAFAKERLEQDAEAYELYQKVLRLDPKNKTARKNLKRLAKTQPTNSPE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
PADGQGF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA