| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is thiG [H]
Identifier: 33862325
GI number: 33862325
Start: 52427
End: 53359
Strand: Reverse
Name: thiG [H]
Synonym: PMT0052
Alternate gene names: 33862325
Gene position: 53359-52427 (Counterclockwise)
Preceding gene: 33862327
Following gene: 33862324
Centisome position: 2.21
GC content: 55.84
Gene sequence:
>933_bases ATGGCGAGCAGGATGGGCATGGAAAAACATGATGATGGGCACAAGCTAAGGCCAATCGGCTCAACCGGGACACTCCGCGA TGACGTTCCAACAACCTCAACAGCGCCAATGGTTCTGACGCACTCCTCACCTGACCTACTCACAATCGGCAAACGCAACT TCCACAGCCGACTTTTTGCAGGCACAGGGAAGTACCCAAGCCTAAAAGTGATGCAAGAGAGTCTGCGCTCTTCAGGATGC GAAATGGTGACTGTTGCAGTCCGCCGTGTACAGACAATGGCATCAGGCCACGCCGGCCTGATAGAAGCCATCGACTGGTC AAAAATATGGATGCTGCCCAACACCGCTGGCTGTGCAACTGCAGAGGAAGCCATTCGTGTAGCCCGACTCGGCCGCGAAC TCGCCAAACTGGCAGGCCAGGAGGACAACAAGTTCGTCAAGCTCGAAGTCATCCCCGACAGCCGCTACCTCCTACCTGAC CCTTTCGGCACCCTTGAGGCCGCTGAACAATTGGTAAAAGAAGGCTTCGAGGTCTTGCCATACATCAATGCCGATCCCCT CTTGGCTAAGCGCCTTGAAGAGGTGGGCTGTGCAACGGTCATGCCACTGGGCTCACCGATTGGATCAGGTCAAGGTCTGA GGAATGCCGCCAACATCTCCCTAATCATTGAAAACGCCCGAGTGCCAGTCGTTGTGGATGCTGGCATCGGTGTCCCTAGT GAAGCTGCACAGGCCTTGGAAATGGGTGCCGACGCAGTGCTGGTTAACAGCGCAATTGCCTTAGCCGGAGATCCAATCAC CATGGCCGAAGCAATGCGCTGGGCAATTCAGGCCGGTAGGCAGGCTTACAGATCAGGTCGCCTACCCGAACGCGCCGCAG CCTCGCCAAGCTCACCGACAACAGGGATTATTGCGGAAGCAAAGACTAAATAA
Upstream 100 bases:
>100_bases TCTCTGAACAGAACCCTCCACGACCAGCGGCACAGCCAATTGGGAGGAATCCAAGGGCATAGTGAGCTCGAAGGGAACCT GACTGTCAATCGAGAGATCC
Downstream 100 bases:
>100_bases TTATGAAGGAACGTAACGGAAAAGTTCCTGCAAGCAATCCTGTCCATAGGGTCCGCCGAGTTGTAAGTGTTACATGCAAG TCACCGAGGAAGAGGGTGGT
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MASRMGMEKHDDGHKLRPIGSTGTLRDDVPTTSTAPMVLTHSSPDLLTIGKRNFHSRLFAGTGKYPSLKVMQESLRSSGC EMVTVAVRRVQTMASGHAGLIEAIDWSKIWMLPNTAGCATAEEAIRVARLGRELAKLAGQEDNKFVKLEVIPDSRYLLPD PFGTLEAAEQLVKEGFEVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGLRNAANISLIIENARVPVVVDAGIGVPS EAAQALEMGADAVLVNSAIALAGDPITMAEAMRWAIQAGRQAYRSGRLPERAAASPSSPTTGIIAEAKTK
Sequences:
>Translated_310_residues MASRMGMEKHDDGHKLRPIGSTGTLRDDVPTTSTAPMVLTHSSPDLLTIGKRNFHSRLFAGTGKYPSLKVMQESLRSSGC EMVTVAVRRVQTMASGHAGLIEAIDWSKIWMLPNTAGCATAEEAIRVARLGRELAKLAGQEDNKFVKLEVIPDSRYLLPD PFGTLEAAEQLVKEGFEVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGLRNAANISLIIENARVPVVVDAGIGVPS EAAQALEMGADAVLVNSAIALAGDPITMAEAMRWAIQAGRQAYRSGRLPERAAASPSSPTTGIIAEAKTK >Mature_309_residues ASRMGMEKHDDGHKLRPIGSTGTLRDDVPTTSTAPMVLTHSSPDLLTIGKRNFHSRLFAGTGKYPSLKVMQESLRSSGCE MVTVAVRRVQTMASGHAGLIEAIDWSKIWMLPNTAGCATAEEAIRVARLGRELAKLAGQEDNKFVKLEVIPDSRYLLPDP FGTLEAAEQLVKEGFEVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGLRNAANISLIIENARVPVVVDAGIGVPSE AAQALEMGADAVLVNSAIALAGDPITMAEAMRWAIQAGRQAYRSGRLPERAAASPSSPTTGIIAEAKTK
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=259, Percent_Identity=54.0540540540541, Blast_Score=263, Evalue=9e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 32906; Mature: 32775
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRMGMEKHDDGHKLRPIGSTGTLRDDVPTTSTAPMVLTHSSPDLLTIGKRNFHSRLFA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHEE GTGKYPSLKVMQESLRSSGCEMVTVAVRRVQTMASGHAGLIEAIDWSKIWMLPNTAGCAT CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCC AEEAIRVARLGRELAKLAGQEDNKFVKLEVIPDSRYLLPDPFGTLEAAEQLVKEGFEVLP HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHCCC YINADPLLAKRLEEVGCATVMPLGSPIGSGQGLRNAANISLIIENARVPVVVDAGIGVPS CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCH EAAQALEMGADAVLVNSAIALAGDPITMAEAMRWAIQAGRQAYRSGRLPERAAASPSSPT HHHHHHHHCCCEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC TGIIAEAKTK CCEEEECCCC >Mature Secondary Structure ASRMGMEKHDDGHKLRPIGSTGTLRDDVPTTSTAPMVLTHSSPDLLTIGKRNFHSRLFA CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHEE GTGKYPSLKVMQESLRSSGCEMVTVAVRRVQTMASGHAGLIEAIDWSKIWMLPNTAGCAT CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCC AEEAIRVARLGRELAKLAGQEDNKFVKLEVIPDSRYLLPDPFGTLEAAEQLVKEGFEVLP HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHCCC YINADPLLAKRLEEVGCATVMPLGSPIGSGQGLRNAANISLIIENARVPVVVDAGIGVPS CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCH EAAQALEMGADAVLVNSAIALAGDPITMAEAMRWAIQAGRQAYRSGRLPERAAASPSSPT HHHHHHHHCCCEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC TGIIAEAKTK CCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]