| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yjeS [H]
Identifier: 33862280
GI number: 33862280
Start: 9585
End: 10559
Strand: Reverse
Name: yjeS [H]
Synonym: PMT0007
Alternate gene names: 33862280
Gene position: 10559-9585 (Counterclockwise)
Preceding gene: 33862288
Following gene: 33862279
Centisome position: 0.44
GC content: 51.18
Gene sequence:
>975_bases ATGGTTGTGAAAATCTGCGCCAACCAAGATCAACTCAGCCATGAGCTCAAAGAGCAAGCAAAAAAACAAGGTTTTGATCC TGTAGGAATTGCCAGGTTCCCTGGTAGTGACCGACTCCAACTTCGCTCCGCTGCTCTACAGCGCTGGCTAAAAGCTGGTC ATCAAGCCGACATGGCATGGATGGCCTCATCGCAAAGGCAACAGGCGGACCAACTACTCGAAGGGATGACAAGCCTGCTG GCGGTAGGTCTGAACTACTTCGTAAATGTACAAAGAGCTCCAGGCAAATTATTAGTTGCTCGCTATGCATGGGGACGGGA CTATCACCGAGTGATCAAGCAAAGGCTCCGAAGAGTAGGTCGCTGGCTTGAACAACAGCGACCTAACTGCCGCTGGAAAA TCTGCGTAGATACCGCTCCATTACTCGACAAAGCCTGGGCAGAAGAGGCCGGTCTCGGTTGGATCGGCAAGCACAGCAAC CTGATCAATACCCAGCGAGGTTCATGGATGGTGCTGGGTCATCTTCTTTGCAACGAACCACTCACCCCAGACCAACCCGC CAAGTCCCTGTGCGGCAAATGCCAATCCTGTCTGGAGATATGTCCCACCGAAGCCATCACCGAACCTTTTGTGATCGATT CACGTCGATGTCTGGCATACCACACAATCGAAAACCGCAACCCTGACTTACCAGAAAACATTGTGAGGTCCTTGGGGAAT TGGGTCGCCGGATGTGACATCTGTCAAGACGTCTGCCCATGGAATCAACAATCTCTTCCCCATAGCAATGATCCTGATGT ACAGCCTCGTGATTGGTTACTCAAGCTGACGCGCAATCAAGCCCTCTCATGGAGCGATACAACTTGGAGTGAACAATTAC GCGGATCTGCTCTGAAAAGAATCAAACCATGGATGTGGCGTCGAAATGCAGCCTCAACGCAAACCAACAAACCTCCTACG CTGCACAACAACTAA
Upstream 100 bases:
>100_bases CCGAGCCAGCGCATCAAAGGAGTTAAACGACCGGCTGAACTTGATCCCAACTCAGAAGCAGGCAAGGCACGATGCCAAAA GGTAATCAAGTGTACGGTTG
Downstream 100 bases:
>100_bases ATCCATGGAATGAAACTGAACCAGCCGCGATATAAACCGCTTAATGGCTGGCTCAGAGGAGCTGTTCTAGGGCTCATCAC CACAATTGTGGCAACACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT LHNN
Sequences:
>Translated_324_residues MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT LHNN >Mature_324_residues MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT LHNN
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=317, Percent_Identity=37.5394321766561, Blast_Score=222, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 36999; Mature: 36999
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAW CEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH MASSQRQQADQLLEGMTSLLAVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHH RWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSNLINTQRGSWMVLGHLLCNEP HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCC LTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHH WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKR HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IKPWMWRRNAASTQTNKPPTLHNN HHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAW CEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH MASSQRQQADQLLEGMTSLLAVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHH RWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSNLINTQRGSWMVLGHLLCNEP HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCC LTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHH WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKR HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IKPWMWRRNAASTQTNKPPTLHNN HHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]