Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32267352

Identifier: 32267352

GI number: 32267352

Start: 1775563

End: 1776204

Strand: Direct

Name: 32267352

Synonym: HH1853

Alternate gene names: NA

Gene position: 1775563-1776204 (Clockwise)

Preceding gene: 32267351

Following gene: 32267353

Centisome position: 98.69

GC content: 34.58

Gene sequence:

>642_bases
ATGAAACAAGAAGATAATGTTTCAAAACTTACCCCACAGGAACTTGAAGAGTTAAGTAATTGGCTATGGAATAATTGCGA
TGATTGCGGACTAATGCTTGAAGATATGACAGATTCTTTACGATATTGCGATGAAAATCCTGCAGATTTAGACCCTAGCG
AACTTGAAGATTGGCTTTTGGAAACAAGACTATTTGCACTTGATGACAATTGCCCTGAGGGAATAAAAGATTTACCAAAA
GCATTAGGTGCATTAAAGGGCTTAAAAGCCATTGTAGCACAGGAACAATCCATTCAAAGCATTCCTAAAGAAATATGTGA
AATCAAGGGTTTAGAAGTTTTGGATTTATTTGATAATGAACTCACACAAATCCCACAAGAAATTGGCAAACTAGAATCTT
TAAGAGAACTTTACTTAAGTGGAAATAACATTACATCTTTGCCAGAGAGTATAAAAAATCTACAATCTTTAGAAATTTTA
TGTTTGAATGACAATCCCATAAAAGCTTTACCAGAGTGGCTAAGCGAGTGTAAGAATCTAAAATGTATCGAAGTAGATGA
TGATGTGGAGATTCCCTCCTGTATTGATAGCACACTTATCAATGCCGATTATGAAGGCTATAGCAGCTATGATTATAGAT
AA

Upstream 100 bases:

>100_bases
TGTAACTTATTTTAAAATTTTACTAAAAACTCTAAAAATTATTATTCAAAAAAAAAAAAAATGCGTGATATAATAATAGT
AAAAACAAAAAGGAGAAACA

Downstream 100 bases:

>100_bases
TCCTCTGCTATAATGGTGTTAATTCATCATAACCAAACACGATAAGAGGCTTTAGGAGGGGAAGTGGCAAAAATTGATAA
GAGTATAAGCAAAGAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK
ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL
CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR

Sequences:

>Translated_213_residues
MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK
ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL
CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR
>Mature_213_residues
MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK
ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL
CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI41281398, Length=114, Percent_Identity=40.3508771929825, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI61742784, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=6e-14,
Organism=Homo sapiens, GI61742786, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI122937315, Length=169, Percent_Identity=31.9526627218935, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI153792305, Length=130, Percent_Identity=33.0769230769231, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI238908508, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI194394161, Length=135, Percent_Identity=31.1111111111111, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI110825984, Length=120, Percent_Identity=30.8333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI95113664, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI16904383, Length=96, Percent_Identity=37.5, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI21389431, Length=112, Percent_Identity=32.1428571428571, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI55770895, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI8923909, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71991531, Length=120, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71991525, Length=120, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71981160, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71981152, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62472958, Length=123, Percent_Identity=34.1463414634146, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007092, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650330, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24650334, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24650332, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362651, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362655, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24650336, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362657, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362653, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221379725, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221379722, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19922294, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI18858105, Length=103, Percent_Identity=35.9223300970874, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24163; Mature: 24163

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLL
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ETRLFALDDNCPEGIKDLPKALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEILCLNDNPIKALPEWLSECKNL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCC
KCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLL
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ETRLFALDDNCPEGIKDLPKALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEILCLNDNPIKALPEWLSECKNL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCC
KCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA