| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267339
Identifier: 32267339
GI number: 32267339
Start: 1761899
End: 1762396
Strand: Direct
Name: 32267339
Synonym: HH1840
Alternate gene names: NA
Gene position: 1761899-1762396 (Clockwise)
Preceding gene: 32267338
Following gene: 32267340
Centisome position: 97.93
GC content: 37.35
Gene sequence:
>498_bases ATGTATAAATTCCACAATTTCATTTTTAGATTCCTAACTCTTTATGTAGGCATCTTTAGTGTAAGTCAAGTTTTTGCTTT AAGCTGTGAGGAAACATTGTGTAAGTCATTGCGTGTAGGTGTGGGCATACCACTTTATCAAACATTTGTTGCTAAAGACG CTCATATAGGAAATTCTGGAGGTTATTTTGCCCTAAGCGGAAGATTAGTTGGATATAGAATCTTAGCTGAAGCTAATGGA CAAGTTGGCATAGGAAGGGCAGAAGCAAAAGAATCATATTTTGCAAATAAAGACTATAAGGGCAAAACGACTTCTAGCAC ACTTGCAGGTGATATAAAGCTTGGCGTGAATGTCTCTAGCGTATCGGTGCCTATTTTTATCACAGGGGTGTATGGTTTTG AAAATTTCTCTCTCTACACAGGCGGTATTTTCTCAAATTACAAAAAAGACGATAAAAAGGTTTGGCAATGTCTTGGCATT ATGCAGGTGCAGAGATAA
Upstream 100 bases:
>100_bases ATTTAAGTTATAAGATTAAAAAAATTTTTTAGAATTTAGCCGTTATGCTTTGATACAAAGAAGTATAACTTCATATTTTA TGCTTTAAAAGGAGGGAATT
Downstream 100 bases:
>100_bases ATGGCTCAACAACTTTGCAGTCCTCATCAAAGATAGAATATTTGCTTGGATATTACTATATTATCAACCAAAAGAGTAAT TATAGATTTAGAGACGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MYKFHNFIFRFLTLYVGIFSVSQVFALSCEETLCKSLRVGVGIPLYQTFVAKDAHIGNSGGYFALSGRLVGYRILAEANG QVGIGRAEAKESYFANKDYKGKTTSSTLAGDIKLGVNVSSVSVPIFITGVYGFENFSLYTGGIFSNYKKDDKKVWQCLGI MQVQR
Sequences:
>Translated_165_residues MYKFHNFIFRFLTLYVGIFSVSQVFALSCEETLCKSLRVGVGIPLYQTFVAKDAHIGNSGGYFALSGRLVGYRILAEANG QVGIGRAEAKESYFANKDYKGKTTSSTLAGDIKLGVNVSSVSVPIFITGVYGFENFSLYTGGIFSNYKKDDKKVWQCLGI MQVQR >Mature_165_residues MYKFHNFIFRFLTLYVGIFSVSQVFALSCEETLCKSLRVGVGIPLYQTFVAKDAHIGNSGGYFALSGRLVGYRILAEANG QVGIGRAEAKESYFANKDYKGKTTSSTLAGDIKLGVNVSSVSVPIFITGVYGFENFSLYTGGIFSNYKKDDKKVWQCLGI MQVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18208; Mature: 18208
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKFHNFIFRFLTLYVGIFSVSQVFALSCEETLCKSLRVGVGIPLYQTFVAKDAHIGNSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC GYFALSGRLVGYRILAEANGQVGIGRAEAKESYFANKDYKGKTTSSTLAGDIKLGVNVSS CEEEEECCEEEEEEEEECCCCEECCHHHHHHHHCCCCCCCCCCCCCEEECEEEECEEECC VSVPIFITGVYGFENFSLYTGGIFSNYKKDDKKVWQCLGIMQVQR EEEEEEEEEEECCCCCEEEECCHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYKFHNFIFRFLTLYVGIFSVSQVFALSCEETLCKSLRVGVGIPLYQTFVAKDAHIGNSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC GYFALSGRLVGYRILAEANGQVGIGRAEAKESYFANKDYKGKTTSSTLAGDIKLGVNVSS CEEEEECCEEEEEEEEECCCCEECCHHHHHHHHCCCCCCCCCCCCCEEECEEEECEEECC VSVPIFITGVYGFENFSLYTGGIFSNYKKDDKKVWQCLGIMQVQR EEEEEEEEEEECCCCCEEEECCHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA