| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is nadA
Identifier: 32267338
GI number: 32267338
Start: 1760723
End: 1761736
Strand: Direct
Name: nadA
Synonym: HH1839
Alternate gene names: 32267338
Gene position: 1760723-1761736 (Clockwise)
Preceding gene: 32267337
Following gene: 32267339
Centisome position: 97.86
GC content: 37.38
Gene sequence:
>1014_bases ATGTCAGCCACACTCACCAATGAAATTAAAGATTTACTCCATAAACTCAATGGGCTTTTGGTAGCACATTATTATCAAAA AGATGAAATTGTTGCCTTGGCAGATTTATGTGGAGATAGTTTGGAGCTTTCCCGTAAGGCTTCAGCGAGTGAGAAAAATC TCATTGTATTTTGTGGTGTAGCATTTATGGGACAAAGCGTTAAGGTGCTTGCTCCACAAAAGCGTGTGATTATGCCTCGT TTAGCGTGTTGTTCTATGGCAAGAATGATAGATAGTGATTATTATGATGAAAGCATTGCTCTTTTGCAATCCTATGGCTT AAGTAAAGATTCTATCTTTCCTATTACTTATATTAATTCAAATGCTGATGTTAAAGCAAAAGTTGCTCAAATGGGAGGGC TTGTTTGCACAAGTGCAAATGCTCATAAGATTTTTAATTTTGCAAAGGAGCAGGGCAAAAAGATATTTTTTCTCCCTGAT AAATGTCTGGGAGAGAATCTCGCTCGTTTAAATAGCAAAAAATCCGCGATATTGGGCACAGATGACAAAGAAAAAGTGCT TAGCGCTGATGTGATTTGCTATGATGGATTCTGTTCTGTGCATCAGCTTTTCACGCCACAAGATATTACCTTTTATCGTG AAAAATTTGCAGATATTAAAATTGTCGTGCATCCTGAATGCGACCCGAGTGTCGTAGAACTTGCTGATTTTGTTGGCTCG ACAAGTCAAATCATTGCTTATGTGCAAAATTTGCCTTTAGAGCAAAAAGTGGCAGTAGGCACAGAATTTAATCTTGTCAA TCGTTTGCGTCCTAAATATAATGGCAAACAAACAACCTTTGTCCTTAGCTCAAGTAAGCCTCAATGTCCCACAATGAATG AAACAACTCTTGAAGATGTGCGTGATGTGCTTCTTGCTTTTGAAGATAATAAGCCTATTAATGAAGTGTTTTTGGATAAT GAGATTCAAAAATGGGCAAAAATCGCCCTTGATAGAATGCTTGAACTCTCTTAA
Upstream 100 bases:
>100_bases ATGGAGCAGATGATTCCAGATGTGCATATTAATGAAAAAGTTAAATTTGCTCAAGACATAGGCACTCATACATAAAATTA TATAAATTTAAGGAATAGTT
Downstream 100 bases:
>100_bases AAGATAAAAGTAATTTTACCTTTTGTAACACTTTCTTAAATTTACAAAAAAAAAAAAACGCTATTTAAGTTATAAGATTA AAAAAATTTTTTAGAATTTA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSATLTNEIKDLLHKLNGLLVAHYYQKDEIVALADLCGDSLELSRKASASEKNLIVFCGVAFMGQSVKVLAPQKRVIMPR LACCSMARMIDSDYYDESIALLQSYGLSKDSIFPITYINSNADVKAKVAQMGGLVCTSANAHKIFNFAKEQGKKIFFLPD KCLGENLARLNSKKSAILGTDDKEKVLSADVICYDGFCSVHQLFTPQDITFYREKFADIKIVVHPECDPSVVELADFVGS TSQIIAYVQNLPLEQKVAVGTEFNLVNRLRPKYNGKQTTFVLSSSKPQCPTMNETTLEDVRDVLLAFEDNKPINEVFLDN EIQKWAKIALDRMLELS
Sequences:
>Translated_337_residues MSATLTNEIKDLLHKLNGLLVAHYYQKDEIVALADLCGDSLELSRKASASEKNLIVFCGVAFMGQSVKVLAPQKRVIMPR LACCSMARMIDSDYYDESIALLQSYGLSKDSIFPITYINSNADVKAKVAQMGGLVCTSANAHKIFNFAKEQGKKIFFLPD KCLGENLARLNSKKSAILGTDDKEKVLSADVICYDGFCSVHQLFTPQDITFYREKFADIKIVVHPECDPSVVELADFVGS TSQIIAYVQNLPLEQKVAVGTEFNLVNRLRPKYNGKQTTFVLSSSKPQCPTMNETTLEDVRDVLLAFEDNKPINEVFLDN EIQKWAKIALDRMLELS >Mature_336_residues SATLTNEIKDLLHKLNGLLVAHYYQKDEIVALADLCGDSLELSRKASASEKNLIVFCGVAFMGQSVKVLAPQKRVIMPRL ACCSMARMIDSDYYDESIALLQSYGLSKDSIFPITYINSNADVKAKVAQMGGLVCTSANAHKIFNFAKEQGKKIFFLPDK CLGENLARLNSKKSAILGTDDKEKVLSADVICYDGFCSVHQLFTPQDITFYREKFADIKIVVHPECDPSVVELADFVGST SQIIAYVQNLPLEQKVAVGTEFNLVNRLRPKYNGKQTTFVLSSSKPQCPTMNETTLEDVRDVLLAFEDNKPINEVFLDNE IQKWAKIALDRMLELS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 3 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=343, Percent_Identity=29.4460641399417, Blast_Score=148, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 37559; Mature: 37428
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATLTNEIKDLLHKLNGLLVAHYYQKDEIVALADLCGDSLELSRKASASEKNLIVFCGV CCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHCCCCHHHHHHCCCCCCCEEEEEEH AFMGQSVKVLAPQKRVIMPRLACCSMARMIDSDYYDESIALLQSYGLSKDSIFPITYINS HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC NADVKAKVAQMGGLVCTSANAHKIFNFAKEQGKKIFFLPDKCLGENLARLNSKKSAILGT CCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEECC DDKEKVLSADVICYDGFCSVHQLFTPQDITFYREKFADIKIVVHPECDPSVVELADFVGS CCHHHHHHHCEEEECCCHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC TSQIIAYVQNLPLEQKVAVGTEFNLVNRLRPKYNGKQTTFVLSSSKPQCPTMNETTLEDV HHHHHHHHHCCCCCHHEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH RDVLLAFEDNKPINEVFLDNEIQKWAKIALDRMLELS HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SATLTNEIKDLLHKLNGLLVAHYYQKDEIVALADLCGDSLELSRKASASEKNLIVFCGV CCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHCCCCHHHHHHCCCCCCCEEEEEEH AFMGQSVKVLAPQKRVIMPRLACCSMARMIDSDYYDESIALLQSYGLSKDSIFPITYINS HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC NADVKAKVAQMGGLVCTSANAHKIFNFAKEQGKKIFFLPDKCLGENLARLNSKKSAILGT CCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEECC DDKEKVLSADVICYDGFCSVHQLFTPQDITFYREKFADIKIVVHPECDPSVVELADFVGS CCHHHHHHHCEEEECCCHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC TSQIIAYVQNLPLEQKVAVGTEFNLVNRLRPKYNGKQTTFVLSSSKPQCPTMNETTLEDV HHHHHHHHHCCCCCHHEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH RDVLLAFEDNKPINEVFLDNEIQKWAKIALDRMLELS HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA