| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is hisD
Identifier: 32267220
GI number: 32267220
Start: 1647128
End: 1648438
Strand: Direct
Name: hisD
Synonym: HH1721
Alternate gene names: 32267220
Gene position: 1647128-1648438 (Clockwise)
Preceding gene: 32267219
Following gene: 32267221
Centisome position: 91.55
GC content: 39.51
Gene sequence:
>1311_bases ATGAAATATCTTGATGTGCGTTTGCCAGAGTTTGCAAATGAATTTCAACAAGTCTTATCTCGTGGAAAAATGGATATGAA AGAAGTTTCATCTCTTGTGCAAGAATTGCTTGATGAGATTCGCACAGAGGGCTTAGATGCTCTAAAGAAGCATATTGCTC GTTTTGATAAATGGGAGGTAAAAAGTTTTGAAGATTTGCGTATCTCGCCAAAAGAGTGTCTTAATGCCTATAATCAGCTT TCTTCAGAATTAAAATCTGCACTTCATCTTGCTTATGATAGAATCTATGCTTTTCATCGCAAACAAAAAATGCAAAGTTG GATTGATTGTGAGGAAAATGGAAACATACTTGGCTCAAAATTTACTCCAATGGAGCGTGCAGGATTATACATTCCCGGTG GTAAAGCAGCTTACCCAAGCTCACTTTTGATGAATGCTATTCCTGCGATTGTTGCAGGAGTTAAAGAGATTGTTGTGTGT TCTCCTACACCGCATAATCAAGCTAATCCCCTTGTGCTTGCAGCATTACATTTGTGTGGTATTACTGAAGTATATAAGGT TGGTGGTGCGAGTGCCATAGGGCTTATGGCTTATGGGTGCAAAGAGATTCCTAAAGTTGATGTTATTACTGGTCCGGGCA ATATTTTTGTTGCTTGTGCCAAAAAACTTGTTTTTGGCGAGGTAAATATTGATATGGTTGCAGGTCCAAGCGAGATAGCA ATTATTGCAGATTCTCAAGCTAATCCGCTTTACATTGCCTATGATTTGCTTTCCCAAGCTGAACACGATGAAATGGCAAG TTCCATACTCATAAGCGATAGTGCCCCACTTATAGAATCTGTGCAAAAACATATTGAACAGATTTTACCCTCAATGCCTA GAGCAGAGATTGCAGGAGCGAGTATTAAAAATCGTGCAGTTATGATATATACGCGCAATTTACAAGAAAGTATAGAGATT GCTAATGCCATTGCTCCCGAACATTTAGAAGTTCTTACAACCACTCCATTTGATACGCTTCCTTATATTAAACACGCAGG AGCCATTTTCTTAGGAGAGCATTCAAGTGAGCCCATTGGAGACTATCTTGCGGGTCCTAATCATACGCTTCCCACAGGCG GAAGTGCGCGTTTCTTTTCACCGCTTGGAGTGGAGCATTTTATGAAAAAAAGTTCAATTATTGCTTTTTCAGCTACTGCA TTAGAAGAAGTTGGGGAATCTTGCGCACTTTTGGCTCAAAGTGAATCTTTATCTGCTCACGCTCAAGCGGTTTTAACAAG ATTAGATTCTATTAAATCAAAGAGGGAGTAG
Upstream 100 bases:
>100_bases TTAGAAGCTTAAAAAACCCTAAAAGGGTATTATAAATGTAATTTGTTTGTTTAGAGTTAATGTATATAATTCTCATTTAT TTTTGATTATGGGGAAAATA
Downstream 100 bases:
>100_bases TTTATGGACGCATTTTTTGAGGGCACGCCATTGCAAAAGTGGCAAGAGATTATCCTTAATGCTTCGCCTACTTTAGTAGG ATTGGAGCTTGAGGCTTTGT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKYLDVRLPEFANEFQQVLSRGKMDMKEVSSLVQELLDEIRTEGLDALKKHIARFDKWEVKSFEDLRISPKECLNAYNQL SSELKSALHLAYDRIYAFHRKQKMQSWIDCEENGNILGSKFTPMERAGLYIPGGKAAYPSSLLMNAIPAIVAGVKEIVVC SPTPHNQANPLVLAALHLCGITEVYKVGGASAIGLMAYGCKEIPKVDVITGPGNIFVACAKKLVFGEVNIDMVAGPSEIA IIADSQANPLYIAYDLLSQAEHDEMASSILISDSAPLIESVQKHIEQILPSMPRAEIAGASIKNRAVMIYTRNLQESIEI ANAIAPEHLEVLTTTPFDTLPYIKHAGAIFLGEHSSEPIGDYLAGPNHTLPTGGSARFFSPLGVEHFMKKSSIIAFSATA LEEVGESCALLAQSESLSAHAQAVLTRLDSIKSKRE
Sequences:
>Translated_436_residues MKYLDVRLPEFANEFQQVLSRGKMDMKEVSSLVQELLDEIRTEGLDALKKHIARFDKWEVKSFEDLRISPKECLNAYNQL SSELKSALHLAYDRIYAFHRKQKMQSWIDCEENGNILGSKFTPMERAGLYIPGGKAAYPSSLLMNAIPAIVAGVKEIVVC SPTPHNQANPLVLAALHLCGITEVYKVGGASAIGLMAYGCKEIPKVDVITGPGNIFVACAKKLVFGEVNIDMVAGPSEIA IIADSQANPLYIAYDLLSQAEHDEMASSILISDSAPLIESVQKHIEQILPSMPRAEIAGASIKNRAVMIYTRNLQESIEI ANAIAPEHLEVLTTTPFDTLPYIKHAGAIFLGEHSSEPIGDYLAGPNHTLPTGGSARFFSPLGVEHFMKKSSIIAFSATA LEEVGESCALLAQSESLSAHAQAVLTRLDSIKSKRE >Mature_436_residues MKYLDVRLPEFANEFQQVLSRGKMDMKEVSSLVQELLDEIRTEGLDALKKHIARFDKWEVKSFEDLRISPKECLNAYNQL SSELKSALHLAYDRIYAFHRKQKMQSWIDCEENGNILGSKFTPMERAGLYIPGGKAAYPSSLLMNAIPAIVAGVKEIVVC SPTPHNQANPLVLAALHLCGITEVYKVGGASAIGLMAYGCKEIPKVDVITGPGNIFVACAKKLVFGEVNIDMVAGPSEIA IIADSQANPLYIAYDLLSQAEHDEMASSILISDSAPLIESVQKHIEQILPSMPRAEIAGASIKNRAVMIYTRNLQESIEI ANAIAPEHLEVLTTTPFDTLPYIKHAGAIFLGEHSSEPIGDYLAGPNHTLPTGGSARFFSPLGVEHFMKKSSIIAFSATA LEEVGESCALLAQSESLSAHAQAVLTRLDSIKSKRE
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=428, Percent_Identity=38.785046728972, Blast_Score=287, Evalue=8e-79, Organism=Saccharomyces cerevisiae, GI6319819, Length=431, Percent_Identity=34.338747099768, Blast_Score=234, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_HELHP (Q7VFF5)
Other databases:
- EMBL: AE017125 - RefSeq: NP_861252.1 - ProteinModelPortal: Q7VFF5 - SMR: Q7VFF5 - GeneID: 1492268 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1721 - NMPDR: fig|235279.1.peg.1721 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: HHEP235279:HH_1721-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47550; Mature: 47550
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 327-327 ACT_SITE 328-328 BINDING 237-237 BINDING 259-259 BINDING 262-262 BINDING 328-328 BINDING 361-361 BINDING 415-415 BINDING 420-420
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLDVRLPEFANEFQQVLSRGKMDMKEVSSLVQELLDEIRTEGLDALKKHIARFDKWEV CCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC KSFEDLRISPKECLNAYNQLSSELKSALHLAYDRIYAFHRKQKMQSWIDCEENGNILGSK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC FTPMERAGLYIPGGKAAYPSSLLMNAIPAIVAGVKEIVVCSPTPHNQANPLVLAALHLCG CCCHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHH ITEVYKVGGASAIGLMAYGCKEIPKVDVITGPGNIFVACAKKLVFGEVNIDMVAGPSEIA HHHHHHCCCCHHHHHHHHCHHCCCCEEEEECCCHHHHHHHHHHHEECCCEEEEECCCEEE IIADSQANPLYIAYDLLSQAEHDEMASSILISDSAPLIESVQKHIEQILPSMPRAEIAGA EEECCCCCCEEEEHHHHHHCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCC SIKNRAVMIYTRNLQESIEIANAIAPEHLEVLTTTPFDTLPYIKHAGAIFLGEHSSEPIG CCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHCCEEEEECCCCCCCH DYLAGPNHTLPTGGSARFFSPLGVEHFMKKSSIIAFSATALEEVGESCALLAQSESLSAH HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHCHHHHHHHCCCCHHHH AQAVLTRLDSIKSKRE HHHHHHHHHHHHHCCC >Mature Secondary Structure MKYLDVRLPEFANEFQQVLSRGKMDMKEVSSLVQELLDEIRTEGLDALKKHIARFDKWEV CCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC KSFEDLRISPKECLNAYNQLSSELKSALHLAYDRIYAFHRKQKMQSWIDCEENGNILGSK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC FTPMERAGLYIPGGKAAYPSSLLMNAIPAIVAGVKEIVVCSPTPHNQANPLVLAALHLCG CCCHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHH ITEVYKVGGASAIGLMAYGCKEIPKVDVITGPGNIFVACAKKLVFGEVNIDMVAGPSEIA HHHHHHCCCCHHHHHHHHCHHCCCCEEEEECCCHHHHHHHHHHHEECCCEEEEECCCEEE IIADSQANPLYIAYDLLSQAEHDEMASSILISDSAPLIESVQKHIEQILPSMPRAEIAGA EEECCCCCCEEEEHHHHHHCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCC SIKNRAVMIYTRNLQESIEIANAIAPEHLEVLTTTPFDTLPYIKHAGAIFLGEHSSEPIG CCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHCCEEEEECCCCCCCH DYLAGPNHTLPTGGSARFFSPLGVEHFMKKSSIIAFSATALEEVGESCALLAQSESLSAH HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHCHHHHHHHCCCCHHHH AQAVLTRLDSIKSKRE HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12810954