| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is 32267204
Identifier: 32267204
GI number: 32267204
Start: 1631612
End: 1632538
Strand: Direct
Name: 32267204
Synonym: HH1705
Alternate gene names: NA
Gene position: 1631612-1632538 (Clockwise)
Preceding gene: 32267203
Following gene: 32267206
Centisome position: 90.69
GC content: 31.5
Gene sequence:
>927_bases ATGCATAAAAAAGTTTTTTTCTTAGGAATTTGTTTAACTATTTGCTTTTCTCAAGAAAATACAAAAAATGGCTTTCATGG CACAATCATACTTGGAGCTGGAGTGAGAATCATCAATAGTCATTTATTTCCCCAACCAAAGGATTATTTAAGTAGCCTTC AAGCTAAACCAAACAATTATTATCAGCCTATCCCTCTAATCGGCTTAGATGTTTCTTATAATGGTATTTGGGGAGAAGAT AAGATTTTTTTAAAAGGCTTTAGTGGCAGAGAGTTAGGAGGATTAAAGCTTGGATATAGCACTTTGATAAAAAAAAGACT TAAAAGCGAATTTGCGCTTATTAGCTCTATATATGAAAGAGCCTATGCTAATCCTTATATTGAAGGAGCACGTAAAGAAA GGCATCTAAGTAAAATTGGTTTTGGTATCACACAATCTTATATGTTCTCTCCCTATCATTACTTATTTGTGAATTATGTG TTGCAACATCACGATTATAAAGGCGAAAGCATACCTTATCCATCTCTTAGGCGCAATAAATTTTTGCATCAAGGTGAAAT TGGTTATTCATTGTATATTGTTAAAATTTTAGCGCATTATGATTATATAGTTGCAGATGGTGAGGCAGAGAGTTATTCAA ATATTGGTGGCAAAATAGATATTAACATTCCTTTGATGAAAGGAACACTTGTTTTCAAACCGAGTTTTGGATATTTTGAG TATGAAACTCTAGCAATCAATCCTATTTTTAACAAACTTAGAACTGGTTTTGTGGCTCAAGCAAGTTTTACAATGTATAA ACTCAACTTTTTTCATCCTCGTGTTTTATTTTTTGCAAGTTATAAAAAAGAAAAGCGCAAAAACAATATCAGCTTTTATA ATGAGGATTTTCAATACATAATGAGTGGGTTAGGCTATAATTTTTGA
Upstream 100 bases:
>100_bases CCTACTTAGCTTTTAACACTTTCTTGTTTTATATTTTTCTTGTGTTTTTTTTTTTTTTGATAGTATGCCTGGCTGTTTTA TCAAATAGGAGGGATACTTT
Downstream 100 bases:
>100_bases TAAAAGCTAAAAAATTAAGATTCTAGGCTTTAGTATTAAAAGTGGCAGGAGTGCTGCCGATGAATCCTCTCCAAAGTGCC GATACACTTAAACCTACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MHKKVFFLGICLTICFSQENTKNGFHGTIILGAGVRIINSHLFPQPKDYLSSLQAKPNNYYQPIPLIGLDVSYNGIWGED KIFLKGFSGRELGGLKLGYSTLIKKRLKSEFALISSIYERAYANPYIEGARKERHLSKIGFGITQSYMFSPYHYLFVNYV LQHHDYKGESIPYPSLRRNKFLHQGEIGYSLYIVKILAHYDYIVADGEAESYSNIGGKIDINIPLMKGTLVFKPSFGYFE YETLAINPIFNKLRTGFVAQASFTMYKLNFFHPRVLFFASYKKEKRKNNISFYNEDFQYIMSGLGYNF
Sequences:
>Translated_308_residues MHKKVFFLGICLTICFSQENTKNGFHGTIILGAGVRIINSHLFPQPKDYLSSLQAKPNNYYQPIPLIGLDVSYNGIWGED KIFLKGFSGRELGGLKLGYSTLIKKRLKSEFALISSIYERAYANPYIEGARKERHLSKIGFGITQSYMFSPYHYLFVNYV LQHHDYKGESIPYPSLRRNKFLHQGEIGYSLYIVKILAHYDYIVADGEAESYSNIGGKIDINIPLMKGTLVFKPSFGYFE YETLAINPIFNKLRTGFVAQASFTMYKLNFFHPRVLFFASYKKEKRKNNISFYNEDFQYIMSGLGYNF >Mature_308_residues MHKKVFFLGICLTICFSQENTKNGFHGTIILGAGVRIINSHLFPQPKDYLSSLQAKPNNYYQPIPLIGLDVSYNGIWGED KIFLKGFSGRELGGLKLGYSTLIKKRLKSEFALISSIYERAYANPYIEGARKERHLSKIGFGITQSYMFSPYHYLFVNYV LQHHDYKGESIPYPSLRRNKFLHQGEIGYSLYIVKILAHYDYIVADGEAESYSNIGGKIDINIPLMKGTLVFKPSFGYFE YETLAINPIFNKLRTGFVAQASFTMYKLNFFHPRVLFFASYKKEKRKNNISFYNEDFQYIMSGLGYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35541; Mature: 35541
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKKVFFLGICLTICFSQENTKNGFHGTIILGAGVRIINSHLFPQPKDYLSSLQAKPNNY CCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCHHEEHHCCCCCCHHHHHHHCCCCCCC YQPIPLIGLDVSYNGIWGEDKIFLKGFSGRELGGLKLGYSTLIKKRLKSEFALISSIYER CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH AYANPYIEGARKERHLSKIGFGITQSYMFSPYHYLFVNYVLQHHDYKGESIPYPSLRRNK HHCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHC FLHQGEIGYSLYIVKILAHYDYIVADGEAESYSNIGGKIDINIPLMKGTLVFKPSFGYFE CCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHCCCCEEEEEEEEEECEEEEECCCCCEE YETLAINPIFNKLRTGFVAQASFTMYKLNFFHPRVLFFASYKKEKRKNNISFYNEDFQYI EEEEEECHHHHHHHCCEEEECEEEEEEEECCCCEEEEEEHHHHHHHCCCCCEECHHHHHH MSGLGYNF HHHCCCCC >Mature Secondary Structure MHKKVFFLGICLTICFSQENTKNGFHGTIILGAGVRIINSHLFPQPKDYLSSLQAKPNNY CCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCHHEEHHCCCCCCHHHHHHHCCCCCCC YQPIPLIGLDVSYNGIWGEDKIFLKGFSGRELGGLKLGYSTLIKKRLKSEFALISSIYER CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH AYANPYIEGARKERHLSKIGFGITQSYMFSPYHYLFVNYVLQHHDYKGESIPYPSLRRNK HHCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHC FLHQGEIGYSLYIVKILAHYDYIVADGEAESYSNIGGKIDINIPLMKGTLVFKPSFGYFE CCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHCCCCEEEEEEEEEECEEEEECCCCCEE YETLAINPIFNKLRTGFVAQASFTMYKLNFFHPRVLFFASYKKEKRKNNISFYNEDFQYI EEEEEECHHHHHHHCCEEEECEEEEEEEECCCCEEEEEEHHHHHHHCCCCCEECHHHHHH MSGLGYNF HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA