| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267183
Identifier: 32267183
GI number: 32267183
Start: 1610064
End: 1611374
Strand: Direct
Name: 32267183
Synonym: HH1684
Alternate gene names: NA
Gene position: 1610064-1611374 (Clockwise)
Preceding gene: 32267182
Following gene: 32267184
Centisome position: 89.49
GC content: 34.02
Gene sequence:
>1311_bases ATGAGGTTTTCAAGTCTAATATATATTGTTTTGGGGATTTATTTAGGTTTTTGTTTAATAGGCTGTGGAGATTCTAAAGA TTCTCAAAAGAAGCAATCTACTCAAGAACAAACGCAAGAGAGCAAGGCTCAAGGGCAAGATATTGCACGAGATTCTGCAT CTGTGCGGGAGTTACTAGGACTGCAAGAAAATAGCACGGCTTTTTATGTGCTTAAAGGCAAGGTAGGCGATAAGGAGCAA GTAGGGTATTTATCTATATGGGAGGATAAAAAGCGTGATATAGATATAGAATCTAGCATAGAGAATATACAAAATGACCC TGAAAAAGGAAGAGTAGTTTATTTAAAGCAAAATAGCAAAGATTTTCCTTTAATGATTGCTATTGCTTTGCCAAATGTGT GGAATGAAGCAATGGGAGACAATGAACATTTTATGTCATCACTTGATGCTCAAAAGATTACTTTTAGTAAAGATGAAAAA GGATTTTTAAAGGTAAGTGGTGTATGGGAAAATGATAACCCTCGCGGCGATAGGCTATTTTGGCATCAAAAAAGTTATTT TAAAGGAGAGAAATTTAGCTTTATTCAAGATGATACATTACCTTTAAATGAGGTAACTTTCGCACAAGGACATTATGCAC ATTCCATTAAAAAAGCAGATAAGGAAGTTGTTTTATTTGAATCTACTTACAAAAAACCTATCATTTTGCCCTCATATAAT CCCAAACTTGAATCTCATATCGTAGAAAAGCTTAACGCGCAACTTGCAGATGGGGCAAAAGATGTGTCGGAGCTACAAAA GCAGCTTCAATATCTAGCAAAGCAGGATTTTAAGGCATATAGCCAAGAAAAAGAGCAATTTAATGCAGAATATGCAAAAA TGTATAGTGTAGAATTTATAGATTCACATATTGTATCATTACAGAAATTTTCTTATGTGTATGAGGGAGGAGCACACGGG GTTCATAGCACAACAATGGAAAGCTATTCTTTGCAAAATGGCGAAAGATTATCAAGCAAATTAGAGGATTTGTTTCTTTT AGATGAGAAAAATAAAAATACACTTTTGCAAATGCTTACTCAAAAACTAGAGACGCCAGAATATAAAGAGAAACTTTTTG AGCAGACTTTGCCGCTGAAAGAATTGCCACAGACTTTTTTTGCTACATCTCAAGGCATAAAATTTGTATGGCATATTTAT GAGATTGCTCCTTATGTTTATGGAGAAATAGAATTTCATATTCCATATAATGACTTAAAATCTTTTGTCAATCCCTCCTC GCCTTATGCGTATTTGTTTGGATTAAAATAA
Upstream 100 bases:
>100_bases ATTGAAAGTGCTGGCGCATACGGACGGATTTTAAGAGGCTGTATGAGTTGTCATATTGTTTCGCGTGGTTGGTAGTTCTT TTAAGGCGAAGGAGGGTATT
Downstream 100 bases:
>100_bases AAAATGAGTATGAAAATCCTCTTTAGTCCAAGTGAAGGCAAAAATAAGCCTCAAAATACAACAAAGACTTCGCATAATGC ATTATCTCACATACTAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRFSSLIYIVLGIYLGFCLIGCGDSKDSQKKQSTQEQTQESKAQGQDIARDSASVRELLGLQENSTAFYVLKGKVGDKEQ VGYLSIWEDKKRDIDIESSIENIQNDPEKGRVVYLKQNSKDFPLMIAIALPNVWNEAMGDNEHFMSSLDAQKITFSKDEK GFLKVSGVWENDNPRGDRLFWHQKSYFKGEKFSFIQDDTLPLNEVTFAQGHYAHSIKKADKEVVLFESTYKKPIILPSYN PKLESHIVEKLNAQLADGAKDVSELQKQLQYLAKQDFKAYSQEKEQFNAEYAKMYSVEFIDSHIVSLQKFSYVYEGGAHG VHSTTMESYSLQNGERLSSKLEDLFLLDEKNKNTLLQMLTQKLETPEYKEKLFEQTLPLKELPQTFFATSQGIKFVWHIY EIAPYVYGEIEFHIPYNDLKSFVNPSSPYAYLFGLK
Sequences:
>Translated_436_residues MRFSSLIYIVLGIYLGFCLIGCGDSKDSQKKQSTQEQTQESKAQGQDIARDSASVRELLGLQENSTAFYVLKGKVGDKEQ VGYLSIWEDKKRDIDIESSIENIQNDPEKGRVVYLKQNSKDFPLMIAIALPNVWNEAMGDNEHFMSSLDAQKITFSKDEK GFLKVSGVWENDNPRGDRLFWHQKSYFKGEKFSFIQDDTLPLNEVTFAQGHYAHSIKKADKEVVLFESTYKKPIILPSYN PKLESHIVEKLNAQLADGAKDVSELQKQLQYLAKQDFKAYSQEKEQFNAEYAKMYSVEFIDSHIVSLQKFSYVYEGGAHG VHSTTMESYSLQNGERLSSKLEDLFLLDEKNKNTLLQMLTQKLETPEYKEKLFEQTLPLKELPQTFFATSQGIKFVWHIY EIAPYVYGEIEFHIPYNDLKSFVNPSSPYAYLFGLK >Mature_436_residues MRFSSLIYIVLGIYLGFCLIGCGDSKDSQKKQSTQEQTQESKAQGQDIARDSASVRELLGLQENSTAFYVLKGKVGDKEQ VGYLSIWEDKKRDIDIESSIENIQNDPEKGRVVYLKQNSKDFPLMIAIALPNVWNEAMGDNEHFMSSLDAQKITFSKDEK GFLKVSGVWENDNPRGDRLFWHQKSYFKGEKFSFIQDDTLPLNEVTFAQGHYAHSIKKADKEVVLFESTYKKPIILPSYN PKLESHIVEKLNAQLADGAKDVSELQKQLQYLAKQDFKAYSQEKEQFNAEYAKMYSVEFIDSHIVSLQKFSYVYEGGAHG VHSTTMESYSLQNGERLSSKLEDLFLLDEKNKNTLLQMLTQKLETPEYKEKLFEQTLPLKELPQTFFATSQGIKFVWHIY EIAPYVYGEIEFHIPYNDLKSFVNPSSPYAYLFGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50154; Mature: 50154
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSSLIYIVLGIYLGFCLIGCGDSKDSQKKQSTQEQTQESKAQGQDIARDSASVRELLG CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC LQENSTAFYVLKGKVGDKEQVGYLSIWEDKKRDIDIESSIENIQNDPEKGRVVYLKQNSK CCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC DFPLMIAIALPNVWNEAMGDNEHFMSSLDAQKITFSKDEKGFLKVSGVWENDNPRGDRLF CCCEEEEEECCHHHHHHCCCCHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEE WHQKSYFKGEKFSFIQDDTLPLNEVTFAQGHYAHSIKKADKEVVLFESTYKKPIILPSYN EECHHHCCCCCCCEECCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCCCEEECCCC PKLESHIVEKLNAQLADGAKDVSELQKQLQYLAKQDFKAYSQEKEQFNAEYAKMYSVEFI CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH DSHIVSLQKFSYVYEGGAHGVHSTTMESYSLQNGERLSSKLEDLFLLDEKNKNTLLQMLT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHHHHHH QKLETPEYKEKLFEQTLPLKELPQTFFATSQGIKFVWHIYEIAPYVYGEIEFHIPYNDLK HHCCCCHHHHHHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECHHHHH SFVNPSSPYAYLFGLK HHCCCCCCEEEEEECC >Mature Secondary Structure MRFSSLIYIVLGIYLGFCLIGCGDSKDSQKKQSTQEQTQESKAQGQDIARDSASVRELLG CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC LQENSTAFYVLKGKVGDKEQVGYLSIWEDKKRDIDIESSIENIQNDPEKGRVVYLKQNSK CCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC DFPLMIAIALPNVWNEAMGDNEHFMSSLDAQKITFSKDEKGFLKVSGVWENDNPRGDRLF CCCEEEEEECCHHHHHHCCCCHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEE WHQKSYFKGEKFSFIQDDTLPLNEVTFAQGHYAHSIKKADKEVVLFESTYKKPIILPSYN EECHHHCCCCCCCEECCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCCCEEECCCC PKLESHIVEKLNAQLADGAKDVSELQKQLQYLAKQDFKAYSQEKEQFNAEYAKMYSVEFI CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH DSHIVSLQKFSYVYEGGAHGVHSTTMESYSLQNGERLSSKLEDLFLLDEKNKNTLLQMLT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHHHHHH QKLETPEYKEKLFEQTLPLKELPQTFFATSQGIKFVWHIYEIAPYVYGEIEFHIPYNDLK HHCCCCHHHHHHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECHHHHH SFVNPSSPYAYLFGLK HHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA