| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is 32267182
Identifier: 32267182
GI number: 32267182
Start: 1609652
End: 1610038
Strand: Direct
Name: 32267182
Synonym: HH1683
Alternate gene names: NA
Gene position: 1609652-1610038 (Clockwise)
Preceding gene: 32267181
Following gene: 32267183
Centisome position: 89.47
GC content: 35.4
Gene sequence:
>387_bases ATGAGGGTTTTATTATTTATAAGTTTGTGTGTATGTGGTGTTTTCGCACAGAATCATCAACTTACACAAATTATGCAGGA TATGGAATGGGCAATGGACAGAATGGAAAGAGGATTTTTGTATAATAGAAAAGAATTAATTAATGAGGGACTTAAAGATT TTAAGGCACTCAACAAGAAATTACTACACATTGACCCAAATACTTATCTTGGTCCGCAAAGGCGCAGAGACATAAATGTT GTAACAGGCGTTTTAAATAGAAATCAAGAGAACATTGAAGCAATGGAGCAATTTTTAAAACGTGATGAATTTATTGAAAG TGCTGGCGCATACGGACGGATTTTAAGAGGCTGTATGAGTTGTCATATTGTTTCGCGTGGTTGGTAG
Upstream 100 bases:
>100_bases CGAAGATTCTTTCTATGGGTATGAGCGGGGATTTTGAAATAGCGATTGCTTATGGGGCAAATCTTGTGCGGATTGGTTCA AAACTATTTGAGGAGGCAAA
Downstream 100 bases:
>100_bases TTCTTTTAAGGCGAAGGAGGGTATTATGAGGTTTTCAAGTCTAATATATATTGTTTTGGGGATTTATTTAGGTTTTTGTT TAATAGGCTGTGGAGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRVLLFISLCVCGVFAQNHQLTQIMQDMEWAMDRMERGFLYNRKELINEGLKDFKALNKKLLHIDPNTYLGPQRRRDINV VTGVLNRNQENIEAMEQFLKRDEFIESAGAYGRILRGCMSCHIVSRGW
Sequences:
>Translated_128_residues MRVLLFISLCVCGVFAQNHQLTQIMQDMEWAMDRMERGFLYNRKELINEGLKDFKALNKKLLHIDPNTYLGPQRRRDINV VTGVLNRNQENIEAMEQFLKRDEFIESAGAYGRILRGCMSCHIVSRGW >Mature_128_residues MRVLLFISLCVCGVFAQNHQLTQIMQDMEWAMDRMERGFLYNRKELINEGLKDFKALNKKLLHIDPNTYLGPQRRRDINV VTGVLNRNQENIEAMEQFLKRDEFIESAGAYGRILRGCMSCHIVSRGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15008; Mature: 15008
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00443 GATASE_TYPE_II ; PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLFISLCVCGVFAQNHQLTQIMQDMEWAMDRMERGFLYNRKELINEGLKDFKALNKK CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLHIDPNTYLGPQRRRDINVVTGVLNRNQENIEAMEQFLKRDEFIESAGAYGRILRGCMS HEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CHIVSRGW HHHHCCCC >Mature Secondary Structure MRVLLFISLCVCGVFAQNHQLTQIMQDMEWAMDRMERGFLYNRKELINEGLKDFKALNKK CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLHIDPNTYLGPQRRRDINVVTGVLNRNQENIEAMEQFLKRDEFIESAGAYGRILRGCMS HEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CHIVSRGW HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA