| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is pgsA
Identifier: 32267179
GI number: 32267179
Start: 1607380
End: 1607925
Strand: Direct
Name: pgsA
Synonym: HH1680
Alternate gene names: 32267179
Gene position: 1607380-1607925 (Clockwise)
Preceding gene: 32267176
Following gene: 32267180
Centisome position: 89.34
GC content: 36.45
Gene sequence:
>546_bases GTGAAGCATTTACCTAATTTTTTAAGTATTTCACGGATATTTTTAGCAGTTTTATTGCTTTTTGTGGCATTACATTATGA TGCAGTATTTCCTGATTATATTGATAAGAGTTGGGTAAATTACCTCACTTGCTTTATTTTTTGTATAGCTTCGATCACAG ATTTTTTTGATGGTTATATTGCGCGTGAATATTGTGTGCATTCACGATTCGGGGAAGTATTTGACCCATTAGCAGATAAA ATGTTGATTCTATCTGCTTTTATCGCACTTTTGATTTTAGATAGGGCATCTCCTTGGGCGGTATTTTTGATTTTATCGCG AGAATTTTTTATTACTGGATTGCGCGTAATGGTGGCAGGAAGTGGGGCAAGTGTGGCAGCAAGTAGAAGTGGCAAATATA AAACAGGTGCACAAATTACTGCAATCGCATTTTTATTGGCAGATTTTTTCCCCGGCGGTGAGATATTACTATGGATTGCA GTAGCGCTTACTCTTTATTCTGGGGCGGACTATACTCTAAAATATGTTAAAAGTTTGAGCGTATGA
Upstream 100 bases:
>100_bases ACTAGTATAACTTTTGATACTTTTGTGTTAAGTTAAATAATCCATTGTAGAATCTACTTTAATTTTCAATTTATATAGGC ATTATTTATAAGGAACAATA
Downstream 100 bases:
>100_bases GTATTTTTATTGCCCTTATCATCTTATCTTTTTTGGTATTTTTTCACGAATTAGGACATTTTTTTGTGGCTCGTCTATGC GGTGTGAGAGTAGAAGTATT
Product: phosphatidylglycerophosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKHLPNFLSISRIFLAVLLLFVALHYDAVFPDYIDKSWVNYLTCFIFCIASITDFFDGYIAREYCVHSRFGEVFDPLADK MLILSAFIALLILDRASPWAVFLILSREFFITGLRVMVAGSGASVAASRSGKYKTGAQITAIAFLLADFFPGGEILLWIA VALTLYSGADYTLKYVKSLSV
Sequences:
>Translated_181_residues MKHLPNFLSISRIFLAVLLLFVALHYDAVFPDYIDKSWVNYLTCFIFCIASITDFFDGYIAREYCVHSRFGEVFDPLADK MLILSAFIALLILDRASPWAVFLILSREFFITGLRVMVAGSGASVAASRSGKYKTGAQITAIAFLLADFFPGGEILLWIA VALTLYSGADYTLKYVKSLSV >Mature_181_residues MKHLPNFLSISRIFLAVLLLFVALHYDAVFPDYIDKSWVNYLTCFIFCIASITDFFDGYIAREYCVHSRFGEVFDPLADK MLILSAFIALLILDRASPWAVFLILSREFFITGLRVMVAGSGASVAASRSGKYKTGAQITAIAFLLADFFPGGEILLWIA VALTLYSGADYTLKYVKSLSV
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=181, Percent_Identity=34.8066298342541, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20167; Mature: 20167
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLPNFLSISRIFLAVLLLFVALHYDAVFPDYIDKSWVNYLTCFIFCIASITDFFDGYI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREYCVHSRFGEVFDPLADKMLILSAFIALLILDRASPWAVFLILSREFFITGLRVMVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEC SGASVAASRSGKYKTGAQITAIAFLLADFFPGGEILLWIAVALTLYSGADYTLKYVKSLS CCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC V C >Mature Secondary Structure MKHLPNFLSISRIFLAVLLLFVALHYDAVFPDYIDKSWVNYLTCFIFCIASITDFFDGYI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREYCVHSRFGEVFDPLADKMLILSAFIALLILDRASPWAVFLILSREFFITGLRVMVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEC SGASVAASRSGKYKTGAQITAIAFLLADFFPGGEILLWIAVALTLYSGADYTLKYVKSLS CCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA