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The map label for this gene is ubiA

Identifier: 32267167

GI number: 32267167

Start: 1596645

End: 1597541

Strand: Direct

Name: ubiA

Synonym: HH1668

Alternate gene names: 32267167

Gene position: 1596645-1597541 (Clockwise)

Preceding gene: 32267158

Following gene: 32267168

Centisome position: 88.74

GC content: 34.11

Gene sequence:

>897_bases
ATGAACTTATTTCAAGCGTTGGGTAGGCGAATAAAAAATTTTAGCGACCTTGTTGCTTTTGAGCATACAATTTTTTCAAG
CAGTTTTATTCTTATTGCAATAGTTGTAGCAAGTATGCAAGTGTATGGGATTCCGTGGTGTGGGTGGGAAACTTTTATTC
TTTGTATATTGGCTCTTGTGAGTGCAAGAAATTTTGCTATGGGCTTTAATCGTCTTAAAGACAGGGATATTGATATACGC
AATTTACGTACAAATAAGCGTCCGAGTGTTGATGGGCGTATTAGTCTTAGCGGTCTTGTAGCCTTTAATGTTATCAATGC
TTTAATTTTTATATTTGTTTCTTATTTTATCAATACCCTTGCGTTTTATCTTTGTGTACCATTTTTAGTTATTTTGGCTT
TTTATTCTTATACCAAACGTTTTAGTGCCATAGCACATTGGGTGCTTGGTGTATGCTTGGGTTTAGCACCCATAGCTGGA
GTTATTGCAGTTATGGGTGAGATTCCTTTGTGGAGTATATTTTTATCTGTGGGGGTGCTATTTTGGGTAGCGGGATTTGA
TTTGCTTTATTCTATTCAAGATATAGAGTTTGATAAGGATAACCATCTACACTCTATTCCTGCGTATTTTGGAGTAAAAG
CTACATTGTGGATTTCGCGTTTATGTCATCTTATAGCAGTAGGATTTTGGGTAAGTTTTGTATATGAAGCACAGCTTGGC
AAAATTGCAGAAATAGGCGTAGTTTTATCTGCTCTTATGCTTTGTTATGAACAATATTTAGTCAGTGTGCATTTAAAAAA
TATTCCCAAAGCTTTCTTTGTTACTAATGGTTATTTGGGTATGATATTTTTTATTTGTATTTTAATAGATTCTATAAGGG
TTGTATATGGATATTAA

Upstream 100 bases:

>100_bases
GCAAGAGTTTTAGCTTATTTTTTGGTAAGGTATTTTAAAATCTTACATTATTTTACCTTAAGCAAGATAAAGAATAATCA
AATCAAGGACTGGATTTAAA

Downstream 100 bases:

>100_bases
AGGCATACTTGAGCAATGCGGTATTTACACACGTATCGTGCCGTGCGAACTTGAAGTAGCTTTTTCAAAGCTAGATGAAG
CTAATCAGGCAACTTTTAAT

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNLFQALGRRIKNFSDLVAFEHTIFSSSFILIAIVVASMQVYGIPWCGWETFILCILALVSARNFAMGFNRLKDRDIDIR
NLRTNKRPSVDGRISLSGLVAFNVINALIFIFVSYFINTLAFYLCVPFLVILAFYSYTKRFSAIAHWVLGVCLGLAPIAG
VIAVMGEIPLWSIFLSVGVLFWVAGFDLLYSIQDIEFDKDNHLHSIPAYFGVKATLWISRLCHLIAVGFWVSFVYEAQLG
KIAEIGVVLSALMLCYEQYLVSVHLKNIPKAFFVTNGYLGMIFFICILIDSIRVVYGY

Sequences:

>Translated_298_residues
MNLFQALGRRIKNFSDLVAFEHTIFSSSFILIAIVVASMQVYGIPWCGWETFILCILALVSARNFAMGFNRLKDRDIDIR
NLRTNKRPSVDGRISLSGLVAFNVINALIFIFVSYFINTLAFYLCVPFLVILAFYSYTKRFSAIAHWVLGVCLGLAPIAG
VIAVMGEIPLWSIFLSVGVLFWVAGFDLLYSIQDIEFDKDNHLHSIPAYFGVKATLWISRLCHLIAVGFWVSFVYEAQLG
KIAEIGVVLSALMLCYEQYLVSVHLKNIPKAFFVTNGYLGMIFFICILIDSIRVVYGY
>Mature_298_residues
MNLFQALGRRIKNFSDLVAFEHTIFSSSFILIAIVVASMQVYGIPWCGWETFILCILALVSARNFAMGFNRLKDRDIDIR
NLRTNKRPSVDGRISLSGLVAFNVINALIFIFVSYFINTLAFYLCVPFLVILAFYSYTKRFSAIAHWVLGVCLGLAPIAG
VIAVMGEIPLWSIFLSVGVLFWVAGFDLLYSIQDIEFDKDNHLHSIPAYFGVKATLWISRLCHLIAVGFWVSFVYEAQLG
KIAEIGVVLSALMLCYEQYLVSVHLKNIPKAFFVTNGYLGMIFFICILIDSIRVVYGY

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 33643; Mature: 33643

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA