| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267149
Identifier: 32267149
GI number: 32267149
Start: 1577318
End: 1578031
Strand: Direct
Name: 32267149
Synonym: HH1650
Alternate gene names: NA
Gene position: 1577318-1578031 (Clockwise)
Preceding gene: 32267148
Following gene: 32267150
Centisome position: 87.67
GC content: 35.43
Gene sequence:
>714_bases ATGAAGCCAATCACATATATGTTCAGCTTTTTAAAATATTATATGTGTATTGTTTGTTGTGTTTGTCTATGGAAAGGTTG TGCTACCTATAAACTTGAAGTAGAGGATGTGAGCTTGTATCACGAGGGTGTGCAAATTATAGATTCTATAAAACCTAAGA GTAAAGTGCGACTTGAGGTAGGACAGACACTTGTGGGAGGCTCAAGCGCGATTCCTTTAGCACTTTTTATTTCTGCGCAA AATCTTGCTTCTCAAAAGGTAATTTTTGATAAGGATTGTGTGCAAATGTATCAAAATGATAAGGCATTAAATTCATTGAG TGATAATGAACTTAAGAGTGCTTCGTTTGATTATGGTTTCATTATAGAATCTTATCATCTTTATATGCCGCCAAAGCCTA TGCCAGAGAATCAGTTTGTAGGAATGCCCTTTATTTATCGGGGATATATGGGTGGATTTTATATATATGATTATATGATT ATTTCTGCTAGAGAGCGACTTTGGCAACAAATGCGCCTTGATGATGAGAGAGCAAAAAAAGCACTTATTATATCAAGTAT GATGCAAAAAAATACTCTTGAACCATATAAAGCACCACAGGGCGGTTTTGTAATTTATGCGCCCCAAAAATTACAAAAGG GGACGCTTGATGTGTATGTGAAAGTGGGCGAGGAAAAACATCGCTTTACATTGCAGCTTAGTAAAATAAAATAA
Upstream 100 bases:
>100_bases CAAATTTATTTTCTGTTGTGTTGCTTTGTATTGGGGGCGCAAAAGCAAGAGAAAGTGATTATTAAAGGACTAGGCTTATT AATTCTGGGCAAGGAGAGCT
Downstream 100 bases:
>100_bases AAGGAGCAAAGATGAAAAAATACTGCATTTATATACTATGGGGAATGCTTATAAGTGTATTGTTAGTAGCTTGTAGTGAT AAACCCACAGATTCTACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKPITYMFSFLKYYMCIVCCVCLWKGCATYKLEVEDVSLYHEGVQIIDSIKPKSKVRLEVGQTLVGGSSAIPLALFISAQ NLASQKVIFDKDCVQMYQNDKALNSLSDNELKSASFDYGFIIESYHLYMPPKPMPENQFVGMPFIYRGYMGGFYIYDYMI ISARERLWQQMRLDDERAKKALIISSMMQKNTLEPYKAPQGGFVIYAPQKLQKGTLDVYVKVGEEKHRFTLQLSKIK
Sequences:
>Translated_237_residues MKPITYMFSFLKYYMCIVCCVCLWKGCATYKLEVEDVSLYHEGVQIIDSIKPKSKVRLEVGQTLVGGSSAIPLALFISAQ NLASQKVIFDKDCVQMYQNDKALNSLSDNELKSASFDYGFIIESYHLYMPPKPMPENQFVGMPFIYRGYMGGFYIYDYMI ISARERLWQQMRLDDERAKKALIISSMMQKNTLEPYKAPQGGFVIYAPQKLQKGTLDVYVKVGEEKHRFTLQLSKIK >Mature_237_residues MKPITYMFSFLKYYMCIVCCVCLWKGCATYKLEVEDVSLYHEGVQIIDSIKPKSKVRLEVGQTLVGGSSAIPLALFISAQ NLASQKVIFDKDCVQMYQNDKALNSLSDNELKSASFDYGFIIESYHLYMPPKPMPENQFVGMPFIYRGYMGGFYIYDYMI ISARERLWQQMRLDDERAKKALIISSMMQKNTLEPYKAPQGGFVIYAPQKLQKGTLDVYVKVGEEKHRFTLQLSKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27302; Mature: 27302
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPITYMFSFLKYYMCIVCCVCLWKGCATYKLEVEDVSLYHEGVQIIDSIKPKSKVRLEV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEE GQTLVGGSSAIPLALFISAQNLASQKVIFDKDCVQMYQNDKALNSLSDNELKSASFDYGF CCEEECCCCCCCEEEEEEHHHHCCCCEEECHHHHHHHHCCHHHHCCCCCCHHCCCCCCEE IIESYHLYMPPKPMPENQFVGMPFIYRGYMGGFYIYDYMIISARERLWQQMRLDDERAKK EEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALIISSMMQKNTLEPYKAPQGGFVIYAPQKLQKGTLDVYVKVGEEKHRFTLQLSKIK HHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCEEEEEEECCCCEEEEEEEECCC >Mature Secondary Structure MKPITYMFSFLKYYMCIVCCVCLWKGCATYKLEVEDVSLYHEGVQIIDSIKPKSKVRLEV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEE GQTLVGGSSAIPLALFISAQNLASQKVIFDKDCVQMYQNDKALNSLSDNELKSASFDYGF CCEEECCCCCCCEEEEEEHHHHCCCCEEECHHHHHHHHCCHHHHCCCCCCHHCCCCCCEE IIESYHLYMPPKPMPENQFVGMPFIYRGYMGGFYIYDYMIISARERLWQQMRLDDERAKK EEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALIISSMMQKNTLEPYKAPQGGFVIYAPQKLQKGTLDVYVKVGEEKHRFTLQLSKIK HHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCEEEEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA