Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32267072

Identifier: 32267072

GI number: 32267072

Start: 1502880

End: 1505837

Strand: Direct

Name: 32267072

Synonym: HH1573

Alternate gene names: NA

Gene position: 1502880-1505837 (Clockwise)

Preceding gene: 32267065

Following gene: 32267073

Centisome position: 83.53

GC content: 32.49

Gene sequence:

>2958_bases
ATGGTTATAACAATGATAATAAAAAAATCCAAAAGCATTGCAAGTATAGTTATTTTTTTACTCATTTTACTTTCGCTCTC
AATTATAGGATATAAGGTTCTTTCCAATGGTATTTATAGTCCTTCTATTAGTTTTGGAAAGACTCATATTGAGGGATTGT
ATCTTAGATTAAATAACAAGTTGATTTTAGAAATACAAAAACTTGACATCTCGGCGTGGCAAACTGAAGATAATTCCCAA
TTACAGGACAAAGAAGATACATCTATGAGTGCTGATGAGATATTGGGCTGGATTAAGAAGTTTTTATTTGTTACTTCTTA
TTTTGAAAAACTTGATATTAAGAATCTTGTTTTTGCAGATAAACTTCAGCGAAGTGTGCATTATGATGGTAAAGAGTATG
TTATTAACTCGCCCACATTTATTGCACGAATGGGTGTAGAAGATAATAATAAAATTATAGATCTTTTTATTTATCAACTT
GATTTTTTGCAGTTTGGTTTGCAAGTGCAAGGAAAATTTTCCTACCAACCACTCAAAAAAACACTTGAAATGAACATAGC
AATTTCACCTAAAGAACCAACTAATGACCCGGAACAACCTACGCTTTTTGTGCATAGTATTACAGATTTTCACAAAATCA
ATATGGAAGCTTCCAGTTCTCACCTTTATAACCTTGAAAGCATTAAGCCTTATATTTTAAAGCTCAATAATCCAACACTT
AATAATTGGTTATTTAAAAATGTGCATTATGATGTTCTCAAACTCCATTCTCTTAGATTTCAAAGCACACTTAATAAGCA
TTTTTTTGCTCAACTCCAAAAAACGCTTGCTCTTGATTTAGCTATCGAATCTCCAAAGGTTTATCTTGCACCTCATCTTA
AGCCTATTGAGGCTACACGAGCGATTTTGTATATGCGAGATGAAAAACTTACTTTTTTGCTCAAAGAGCCATTTTTTACA
AATATGAATCTTGATGGTTCTGAAGTTACAATAAGTAATATTTTTACCCAGCCGTTTGGTGTTCAAATTGCCATTCGTTC
TCATAATGCTATGCTTAACAATGAGTTGAGTGATTTGCTTCATACATATCACATTAATGTGCCTTTGCGCAGCGTAGATT
CTAATTTAGAGGTAAATCTCAATATTGATATACAGAGCAAAGATAAACGGATTCATACATTTGTTAATGGTAATATCACT
ACGCCAAATACGACATTAGAAGCAGGAGGGCAAAAGCTTATAGCAGATAATTTCAATCTTATTTTTGTTAATGCGCCCAA
TAGAGCTTATATACAGCTTCTTAATACAAAAATTAATTATGCTAATAATATTCAGGGCATACTTAATATCTTATGGAATC
TACAAGATTCTAAGTTACAAGGAGATTTGCTTATTGATAAGTTTGCTCTTAGCTCACAGAATCTCTCTCAAGCTAAGTCT
TTACCGAAAATACCAAAAGAAAGCGATGAATTAACAAAGCGGATTATTCAAGCTATTTATGAAGAATCACAAAAAGGTTT
TAGTGAAGAGATTGTGAAAATTGATAAAAGTAATCTTAAAAAAATTAGTATTATAGGAGATTTAGGAGAAGATAAAATTA
TTACTTTGCCAGATTTTGGTATGAAAATTCGCATAGGAGAAGAGAGTGTATTTGAATTGAGTGATATTGCCAAAATTTAT
CCATATTCACCTATTTTGCAGTATTTTGGCATACCAAATGGTTCAATTAAGCTTTGGACAAAGGATTTTGAAACGATGCA
CTTAAATGCTAAAGTAGATAATCTAACCTATCCACTTTACGATAAAGATGCTCAACGTTTAAGTCATTTCTTCCTTGAGG
GAGTAATTAATAAGAGCGGTATATTCATTGATTCAAAAAATAAAAAATTTACATTTATAAAAGAGGGTAATGTTGTTAAA
ATTATTCTTGATGGATATAATCTGCGCATTGACGAAGTTTTTTCAAGCAAGATTCCCGCACTCGCACAGATTAAACAAGA
AAATGAGAAAGAAGAGATTCTTACTCTAGAGCAACGTAGAAAACAAGAAGAATTTATTAGAGCAAAACAAAGATATGAGC
GTGAAAATAAGCTCTCACCACATATTGTTTATCTTGAGACACGTAATATGGATTTTTATCTCAACCAATATGTGATTCCA
TCAGACGTAGCATCGATTACTTTGCGTGATGGGATAATACGAGCTGATGTTACCTATGGCAATGGAGTGGCAAATGTAGA
TATGGCATATTCACGTGCAGTTTTACGTTTGAGCAATTTTAGCGATAAGTTTCTTAATCGTGTATGGCAACGTGATATTT
TTCGTGGAGGACTTTTTAATTTTAAGGGCATTTATGATGAGGGCATACTTAAAGGCGAAATTAGTATGCAAAATACGATT
TATCAAGATTTAGCCATTGTGCAAAATGTTCTTGCACTCATCGATACAATTCCTGCGTTGCTAACTTTTCGCAAACCCGG
ACTTGGTGCAAATGGTTATGAGATTAAAAATGGAAAGATAAATCTTGTTATTAATGATGAGTATTTGGTGCTTGAGAATA
TTAATTTGGAGGGAAGTTCTATTGATGTGGAGGGTGGAGGACTTGTTGAGTTAAAGAATAAGGAACTGGATATAGTGTTA
AAAGCCTCTACTCTCAAGACTTTAACGGATATTATTAATACTATCCCATTACTTAATTATGTTATTTTAGGGAATGATGG
CAAAATAACTACGGGAATTATGCTAAAGGGCACACTTGATAATCCAAAGAGTGAAGTGAGTGTTGTAGAAGATATTTTAT
TAAGCCCTTTTGAAATGGTGGGTAGAATCTTAAAGCCAGTGGAAAAACTTTTAAATAATATTTCAAATGCGCTTGATGAA
AGTATAGATGCGCCACCAGAGATGCTTGATTCTACCCAATTACCTCAAGATAACCTCAATATCCCACAACAAGAATAA

Upstream 100 bases:

>100_bases
TTGCCCGTTATCATTTAAGTATGCTATAATTTTGGGCAGTGAGCCTTTGGGCAGATTGATTATGCGTTCAGTTTGCACAG
GGTGAAGCAAATAAAACAAT

Downstream 100 bases:

>100_bases
TAACAAATAAAAATGAGGAGTAATCTTGTTATCTGATTTGAGTTATAATTGTGCTTTTTAAAAGCACAAACAAGGATAGT
GAGCAAAGGATTAAAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 985; Mature: 985

Protein sequence:

>985_residues
MVITMIIKKSKSIASIVIFLLILLSLSIIGYKVLSNGIYSPSISFGKTHIEGLYLRLNNKLILEIQKLDISAWQTEDNSQ
LQDKEDTSMSADEILGWIKKFLFVTSYFEKLDIKNLVFADKLQRSVHYDGKEYVINSPTFIARMGVEDNNKIIDLFIYQL
DFLQFGLQVQGKFSYQPLKKTLEMNIAISPKEPTNDPEQPTLFVHSITDFHKINMEASSSHLYNLESIKPYILKLNNPTL
NNWLFKNVHYDVLKLHSLRFQSTLNKHFFAQLQKTLALDLAIESPKVYLAPHLKPIEATRAILYMRDEKLTFLLKEPFFT
NMNLDGSEVTISNIFTQPFGVQIAIRSHNAMLNNELSDLLHTYHINVPLRSVDSNLEVNLNIDIQSKDKRIHTFVNGNIT
TPNTTLEAGGQKLIADNFNLIFVNAPNRAYIQLLNTKINYANNIQGILNILWNLQDSKLQGDLLIDKFALSSQNLSQAKS
LPKIPKESDELTKRIIQAIYEESQKGFSEEIVKIDKSNLKKISIIGDLGEDKIITLPDFGMKIRIGEESVFELSDIAKIY
PYSPILQYFGIPNGSIKLWTKDFETMHLNAKVDNLTYPLYDKDAQRLSHFFLEGVINKSGIFIDSKNKKFTFIKEGNVVK
IILDGYNLRIDEVFSSKIPALAQIKQENEKEEILTLEQRRKQEEFIRAKQRYERENKLSPHIVYLETRNMDFYLNQYVIP
SDVASITLRDGIIRADVTYGNGVANVDMAYSRAVLRLSNFSDKFLNRVWQRDIFRGGLFNFKGIYDEGILKGEISMQNTI
YQDLAIVQNVLALIDTIPALLTFRKPGLGANGYEIKNGKINLVINDEYLVLENINLEGSSIDVEGGGLVELKNKELDIVL
KASTLKTLTDIINTIPLLNYVILGNDGKITTGIMLKGTLDNPKSEVSVVEDILLSPFEMVGRILKPVEKLLNNISNALDE
SIDAPPEMLDSTQLPQDNLNIPQQE

Sequences:

>Translated_985_residues
MVITMIIKKSKSIASIVIFLLILLSLSIIGYKVLSNGIYSPSISFGKTHIEGLYLRLNNKLILEIQKLDISAWQTEDNSQ
LQDKEDTSMSADEILGWIKKFLFVTSYFEKLDIKNLVFADKLQRSVHYDGKEYVINSPTFIARMGVEDNNKIIDLFIYQL
DFLQFGLQVQGKFSYQPLKKTLEMNIAISPKEPTNDPEQPTLFVHSITDFHKINMEASSSHLYNLESIKPYILKLNNPTL
NNWLFKNVHYDVLKLHSLRFQSTLNKHFFAQLQKTLALDLAIESPKVYLAPHLKPIEATRAILYMRDEKLTFLLKEPFFT
NMNLDGSEVTISNIFTQPFGVQIAIRSHNAMLNNELSDLLHTYHINVPLRSVDSNLEVNLNIDIQSKDKRIHTFVNGNIT
TPNTTLEAGGQKLIADNFNLIFVNAPNRAYIQLLNTKINYANNIQGILNILWNLQDSKLQGDLLIDKFALSSQNLSQAKS
LPKIPKESDELTKRIIQAIYEESQKGFSEEIVKIDKSNLKKISIIGDLGEDKIITLPDFGMKIRIGEESVFELSDIAKIY
PYSPILQYFGIPNGSIKLWTKDFETMHLNAKVDNLTYPLYDKDAQRLSHFFLEGVINKSGIFIDSKNKKFTFIKEGNVVK
IILDGYNLRIDEVFSSKIPALAQIKQENEKEEILTLEQRRKQEEFIRAKQRYERENKLSPHIVYLETRNMDFYLNQYVIP
SDVASITLRDGIIRADVTYGNGVANVDMAYSRAVLRLSNFSDKFLNRVWQRDIFRGGLFNFKGIYDEGILKGEISMQNTI
YQDLAIVQNVLALIDTIPALLTFRKPGLGANGYEIKNGKINLVINDEYLVLENINLEGSSIDVEGGGLVELKNKELDIVL
KASTLKTLTDIINTIPLLNYVILGNDGKITTGIMLKGTLDNPKSEVSVVEDILLSPFEMVGRILKPVEKLLNNISNALDE
SIDAPPEMLDSTQLPQDNLNIPQQE
>Mature_985_residues
MVITMIIKKSKSIASIVIFLLILLSLSIIGYKVLSNGIYSPSISFGKTHIEGLYLRLNNKLILEIQKLDISAWQTEDNSQ
LQDKEDTSMSADEILGWIKKFLFVTSYFEKLDIKNLVFADKLQRSVHYDGKEYVINSPTFIARMGVEDNNKIIDLFIYQL
DFLQFGLQVQGKFSYQPLKKTLEMNIAISPKEPTNDPEQPTLFVHSITDFHKINMEASSSHLYNLESIKPYILKLNNPTL
NNWLFKNVHYDVLKLHSLRFQSTLNKHFFAQLQKTLALDLAIESPKVYLAPHLKPIEATRAILYMRDEKLTFLLKEPFFT
NMNLDGSEVTISNIFTQPFGVQIAIRSHNAMLNNELSDLLHTYHINVPLRSVDSNLEVNLNIDIQSKDKRIHTFVNGNIT
TPNTTLEAGGQKLIADNFNLIFVNAPNRAYIQLLNTKINYANNIQGILNILWNLQDSKLQGDLLIDKFALSSQNLSQAKS
LPKIPKESDELTKRIIQAIYEESQKGFSEEIVKIDKSNLKKISIIGDLGEDKIITLPDFGMKIRIGEESVFELSDIAKIY
PYSPILQYFGIPNGSIKLWTKDFETMHLNAKVDNLTYPLYDKDAQRLSHFFLEGVINKSGIFIDSKNKKFTFIKEGNVVK
IILDGYNLRIDEVFSSKIPALAQIKQENEKEEILTLEQRRKQEEFIRAKQRYERENKLSPHIVYLETRNMDFYLNQYVIP
SDVASITLRDGIIRADVTYGNGVANVDMAYSRAVLRLSNFSDKFLNRVWQRDIFRGGLFNFKGIYDEGILKGEISMQNTI
YQDLAIVQNVLALIDTIPALLTFRKPGLGANGYEIKNGKINLVINDEYLVLENINLEGSSIDVEGGGLVELKNKELDIVL
KASTLKTLTDIINTIPLLNYVILGNDGKITTGIMLKGTLDNPKSEVSVVEDILLSPFEMVGRILKPVEKLLNNISNALDE
SIDAPPEMLDSTQLPQDNLNIPQQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 112085; Mature: 112085

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVITMIIKKSKSIASIVIFLLILLSLSIIGYKVLSNGIYSPSISFGKTHIEGLYLRLNNK
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCE
LILEIQKLDISAWQTEDNSQLQDKEDTSMSADEILGWIKKFLFVTSYFEKLDIKNLVFAD
EEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KLQRSVHYDGKEYVINSPTFIARMGVEDNNKIIDLFIYQLDFLQFGLQVQGKFSYQPLKK
HHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCEEEEEECHHHHHH
TLEMNIAISPKEPTNDPEQPTLFVHSITDFHKINMEASSSHLYNLESIKPYILKLNNPTL
CEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEECCCCCEEEEEECCCCC
NNWLFKNVHYDVLKLHSLRFQSTLNKHFFAQLQKTLALDLAIESPKVYLAPHLKPIEATR
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCHHHCE
AILYMRDEKLTFLLKEPFFTNMNLDGSEVTISNIFTQPFGVQIAIRSHNAMLNNELSDLL
EEEEEECCCEEEEEECCCEECCCCCCCEEEEEHHCCCCCCEEEEEECCCCHHHHHHHHHH
HTYHINVPLRSVDSNLEVNLNIDIQSKDKRIHTFVNGNITTPNTTLEAGGQKLIADNFNL
HHEEECCCCEECCCCEEEEEEEEEECCCCEEEEEECCEEECCCCCHHCCCCEEEECCCCE
IFVNAPNRAYIQLLNTKINYANNIQGILNILWNLQDSKLQGDLLIDKFALSSQNLSQAKS
EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCHHHHHC
LPKIPKESDELTKRIIQAIYEESQKGFSEEIVKIDKSNLKKISIIGDLGEDKIITLPDFG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCC
MKIRIGEESVFELSDIAKIYPYSPILQYFGIPNGSIKLWTKDFETMHLNAKVDNLTYPLY
EEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCCCC
DKDAQRLSHFFLEGVINKSGIFIDSKNKKFTFIKEGNVVKIILDGYNLRIDEVFSSKIPA
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEEHHHHHCCCCH
LAQIKQENEKEEILTLEQRRKQEEFIRAKQRYERENKLSPHIVYLETRNMDFYLNQYVIP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCEECC
SDVASITLRDGIIRADVTYGNGVANVDMAYSRAVLRLSNFSDKFLNRVWQRDIFRGGLFN
CCHHEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
FKGIYDEGILKGEISMQNTIYQDLAIVQNVLALIDTIPALLTFRKPGLGANGYEIKNGKI
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCEE
NLVINDEYLVLENINLEGSSIDVEGGGLVELKNKELDIVLKASTLKTLTDIINTIPLLNY
EEEECCCEEEEEECCCCCCEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHEE
VILGNDGKITTGIMLKGTLDNPKSEVSVVEDILLSPFEMVGRILKPVEKLLNNISNALDE
EEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIDAPPEMLDSTQLPQDNLNIPQQE
HCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVITMIIKKSKSIASIVIFLLILLSLSIIGYKVLSNGIYSPSISFGKTHIEGLYLRLNNK
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCE
LILEIQKLDISAWQTEDNSQLQDKEDTSMSADEILGWIKKFLFVTSYFEKLDIKNLVFAD
EEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KLQRSVHYDGKEYVINSPTFIARMGVEDNNKIIDLFIYQLDFLQFGLQVQGKFSYQPLKK
HHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCEEEEEECHHHHHH
TLEMNIAISPKEPTNDPEQPTLFVHSITDFHKINMEASSSHLYNLESIKPYILKLNNPTL
CEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEECCCCCEEEEEECCCCC
NNWLFKNVHYDVLKLHSLRFQSTLNKHFFAQLQKTLALDLAIESPKVYLAPHLKPIEATR
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCHHHCE
AILYMRDEKLTFLLKEPFFTNMNLDGSEVTISNIFTQPFGVQIAIRSHNAMLNNELSDLL
EEEEEECCCEEEEEECCCEECCCCCCCEEEEEHHCCCCCCEEEEEECCCCHHHHHHHHHH
HTYHINVPLRSVDSNLEVNLNIDIQSKDKRIHTFVNGNITTPNTTLEAGGQKLIADNFNL
HHEEECCCCEECCCCEEEEEEEEEECCCCEEEEEECCEEECCCCCHHCCCCEEEECCCCE
IFVNAPNRAYIQLLNTKINYANNIQGILNILWNLQDSKLQGDLLIDKFALSSQNLSQAKS
EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCHHHHHC
LPKIPKESDELTKRIIQAIYEESQKGFSEEIVKIDKSNLKKISIIGDLGEDKIITLPDFG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCC
MKIRIGEESVFELSDIAKIYPYSPILQYFGIPNGSIKLWTKDFETMHLNAKVDNLTYPLY
EEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCCCC
DKDAQRLSHFFLEGVINKSGIFIDSKNKKFTFIKEGNVVKIILDGYNLRIDEVFSSKIPA
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEEHHHHHCCCCH
LAQIKQENEKEEILTLEQRRKQEEFIRAKQRYERENKLSPHIVYLETRNMDFYLNQYVIP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCEECC
SDVASITLRDGIIRADVTYGNGVANVDMAYSRAVLRLSNFSDKFLNRVWQRDIFRGGLFN
CCHHEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
FKGIYDEGILKGEISMQNTIYQDLAIVQNVLALIDTIPALLTFRKPGLGANGYEIKNGKI
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCEE
NLVINDEYLVLENINLEGSSIDVEGGGLVELKNKELDIVLKASTLKTLTDIINTIPLLNY
EEEECCCEEEEEECCCCCCEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHEE
VILGNDGKITTGIMLKGTLDNPKSEVSVVEDILLSPFEMVGRILKPVEKLLNNISNALDE
EEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIDAPPEMLDSTQLPQDNLNIPQQE
HCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA