Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is acpS

Identifier: 32267054

GI number: 32267054

Start: 1490054

End: 1490416

Strand: Direct

Name: acpS

Synonym: HH1555

Alternate gene names: 32267054

Gene position: 1490054-1490416 (Clockwise)

Preceding gene: 32267053

Following gene: 32267065

Centisome position: 82.82

GC content: 37.47

Gene sequence:

>363_bases
TTGATAGGGATTGATATTATTAGTATTGCTCGTATGCAGAAATTTATAGAGAAGTTTGACAGAGGTGCATTGGAGCGTTT
TCTTTGTGAAAAAGAGATAGCTCTTTGTATGAATACCAATAAATCTATAAATATTCCTCGTGCAGCTGGATTCTGGGCGG
CAAAAGAAGCGTGTTCTAAGGCATTAGGTGTAGGTATAGGGAGTAAGCTAAACTTTTTAGATATGCACATAAGCAAGAGT
AGTACAAACGCACCCAGCATTCATCTTGCATCTGAAAAAATAAATGATTTTAATGTAACAAATATTGCACTAAGCATCAG
CCACGATGGGGGATTTGCCATTGCTGTGGTAGTCGTCATTTAG

Upstream 100 bases:

>100_bases
AATCGTGTCAAAGATGAGATTGTAAAACGTATTAATGAATTTTTGATTGATGGACAAGTGAGTGATATCTTTTTTGTTGA
ATTTGTGGTGAGTTAGTTGA

Downstream 100 bases:

>100_bases
GCTTTTTTGGTCTTTGTTTAATCCAATCAACATTACTTAAATCATTTATCTTTATATTTGTTTTATCATAATTTTTGATA
ATTATTTCATCTGCAAAACT

Product: 4'-phosphopantetheinyl transferase

Products: NA

Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIGIDIISIARMQKFIEKFDRGALERFLCEKEIALCMNTNKSINIPRAAGFWAAKEACSKALGVGIGSKLNFLDMHISKS
STNAPSIHLASEKINDFNVTNIALSISHDGGFAIAVVVVI

Sequences:

>Translated_120_residues
MIGIDIISIARMQKFIEKFDRGALERFLCEKEIALCMNTNKSINIPRAAGFWAAKEACSKALGVGIGSKLNFLDMHISKS
STNAPSIHLASEKINDFNVTNIALSISHDGGFAIAVVVVI
>Mature_120_residues
MIGIDIISIARMQKFIEKFDRGALERFLCEKEIALCMNTNKSINIPRAAGFWAAKEACSKALGVGIGSKLNFLDMHISKS
STNAPSIHLASEKINDFNVTNIALSISHDGGFAIAVVVVI

Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]

COG id: COG0736

COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008278
- InterPro:   IPR002582
- InterPro:   IPR004568
- ProDom:   PD004282 [H]

Pfam domain/function: PF01648 ACPS [H]

EC number: =2.7.8.7 [H]

Molecular weight: Translated: 12980; Mature: 12980

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIDIISIARMQKFIEKFDRGALERFLCEKEIALCMNTNKSINIPRAAGFWAAKEACSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHH
ALGVGIGSKLNFLDMHISKSSTNAPSIHLASEKINDFNVTNIALSISHDGGFAIAVVVVI
HHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MIGIDIISIARMQKFIEKFDRGALERFLCEKEIALCMNTNKSINIPRAAGFWAAKEACSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHH
ALGVGIGSKLNFLDMHISKSSTNAPSIHLASEKINDFNVTNIALSISHDGGFAIAVVVVI
HHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA