Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is yhhF [C]

Identifier: 32267052

GI number: 32267052

Start: 1488866

End: 1489456

Strand: Direct

Name: yhhF [C]

Synonym: HH1553

Alternate gene names: 32267052

Gene position: 1488866-1489456 (Clockwise)

Preceding gene: 32267051

Following gene: 32267053

Centisome position: 82.75

GC content: 33.84

Gene sequence:

>591_bases
ATGGGCGTTGTAAAATTTCATATTCAAGCAGGCATACTTAAACATCTCCCTTTAATATGGAATAATCAAGAAAGCACGCG
CCCAACGAAATCTATTGTGCGAGAATCTTTTTTTAACACAATGAGCATAAATATTGTAGAGTGTGTATTTGTTGAAGCAT
TTGGTGGTTGTGGTTCGATGGGAATTGAAGCACTTTCTCGCGGAGCAAGTGAAGCAATATTTTATGAGATAGACAAAAGA
GCATATAATATTTTGTTGCAAAATCTTGCATTTGCACAAAAAAGAGCATCAGGGCTAAAATTTTATGCTTACAATACCGA
TTTTTTTACACAAAGTTTTCAAAGATGGATTACTACAAAAGAAAATGTGATTTTATATTTTGACCCACCCTTTTGCATTA
GGGAAGGTATGGGAGATATTTATGAACGTCTTTTGACAATGGTAGAAAATCTTGGACAATGTAGTGTGAATTTTATTGTT
TTTGAACATTGGAGTGGGTATAATATGCCTTCCATTGTTGGGGAATATATACTGCTTAAGACTCGTCAATTTGGTAAAAG
CAGCCTCACTTATTACACATTAAAGGATTAA

Upstream 100 bases:

>100_bases
AAGTGCAAGAGAGCTTACACAAAAAATTATCGCTCTTTTGAAGCATACATAACATTTTAATAAATATTGAGCACATTAAC
ATAGAACAAGCGATACAAAG

Downstream 100 bases:

>100_bases
TTATGGCAGAAGAAGAAAAAGCAGCAGAAAGTGGCGGAGATAAAAAAAGCAAAGCAATTTTATTTGTTATTATTGGCATT
GTGGTAGTGCTTCTTCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: N6-Adenine-Specific Methylase; N-6 Adenine Methyltransferase; DNA Methylase; Methylase; RNA Methyltransferase RsmD Family; Site-Specific DNA Methyltransferase; Methylase YhhF

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MGVVKFHIQAGILKHLPLIWNNQESTRPTKSIVRESFFNTMSINIVECVFVEAFGGCGSMGIEALSRGASEAIFYEIDKR
AYNILLQNLAFAQKRASGLKFYAYNTDFFTQSFQRWITTKENVILYFDPPFCIREGMGDIYERLLTMVENLGQCSVNFIV
FEHWSGYNMPSIVGEYILLKTRQFGKSSLTYYTLKD

Sequences:

>Translated_196_residues
MGVVKFHIQAGILKHLPLIWNNQESTRPTKSIVRESFFNTMSINIVECVFVEAFGGCGSMGIEALSRGASEAIFYEIDKR
AYNILLQNLAFAQKRASGLKFYAYNTDFFTQSFQRWITTKENVILYFDPPFCIREGMGDIYERLLTMVENLGQCSVNFIV
FEHWSGYNMPSIVGEYILLKTRQFGKSSLTYYTLKD
>Mature_195_residues
GVVKFHIQAGILKHLPLIWNNQESTRPTKSIVRESFFNTMSINIVECVFVEAFGGCGSMGIEALSRGASEAIFYEIDKRA
YNILLQNLAFAQKRASGLKFYAYNTDFFTQSFQRWITTKENVILYFDPPFCIREGMGDIYERLLTMVENLGQCSVNFIVF
EHWSGYNMPSIVGEYILLKTRQFGKSSLTYYTLKD

Specific function: Unknown

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 22547; Mature: 22416

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVKFHIQAGILKHLPLIWNNQESTRPTKSIVRESFFNTMSINIVECVFVEAFGGCGSM
CCEEEEEHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHH
GIEALSRGASEAIFYEIDKRAYNILLQNLAFAQKRASGLKFYAYNTDFFTQSFQRWITTK
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC
ENVILYFDPPFCIREGMGDIYERLLTMVENLGQCSVNFIVFEHWSGYNMPSIVGEYILLK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
TRQFGKSSLTYYTLKD
HHHCCCCCEEEEEECC
>Mature Secondary Structure 
GVVKFHIQAGILKHLPLIWNNQESTRPTKSIVRESFFNTMSINIVECVFVEAFGGCGSM
CEEEEEHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHH
GIEALSRGASEAIFYEIDKRAYNILLQNLAFAQKRASGLKFYAYNTDFFTQSFQRWITTK
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC
ENVILYFDPPFCIREGMGDIYERLLTMVENLGQCSVNFIVFEHWSGYNMPSIVGEYILLK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
TRQFGKSSLTYYTLKD
HHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA