| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267040
Identifier: 32267040
GI number: 32267040
Start: 1477980
End: 1479989
Strand: Direct
Name: 32267040
Synonym: HH1541
Alternate gene names: NA
Gene position: 1477980-1479989 (Clockwise)
Preceding gene: 32267038
Following gene: 32267041
Centisome position: 82.15
GC content: 38.31
Gene sequence:
>2010_bases ATGCTTTTTAGCACTTTTGCTTATGCAGATAATATTTTAGAATCTGCTGCAAATGAGCGCTCAAACACGAGTAGAGGCAT TGTAGAAAATAAACGTGTATTACCTAAATCTGTAGTAAAGGCGGTTTTTAGCAAAGATTTACAATCTACAACAAATATAA CCTGGCAAGGTAAAGATACGATTTTGCACAGCGGCGATATTGCCAAGTCAATGCTGCAAGTACCTGGATTCTCTATGACT CGCAAAGGTGGTGGTGGAAGTGAGGTTATATTTCGCTCACAAGTTGCTTCAAGATTGCCTATATTTTTAAATAGCGGTGT GTTAAATGGTGCTTGTGGCGGGCGTATGGATACGACTACGACTTATATATTTCCGGAAAATTACAATCGTATCACTTTTC TTAAAGGTCCTCAAGATGTTCGTTATGGTGCACTTATAAGTGGTGGCTTACTTTTTGAACGCGATATTTTAAGACTTGGT AAGGGAAGTTTTAATGTTGATACAAGTGCAATGTATGGGAGTTTTAATCGTTTTGATATAAATGCGAATGCTTTAGCTGG GGGAAAATATGGTTCTTTGCAGGCGATAGTTTCACATTATGAATCTGCAGATTATCGTGCTGGAGATAGGAGAATCGTGC ATTCAGCCTATAATAGAGAATCTGCAAGTCTTATAGGCACATTTACACCTACTTCAAGCACAGCTCTTGAGTTTGATATT GATATAGGACGTGGCTGGGCTTCTTATGCAGATAGAGCAATGGACGCTCGGACATTTGATAGAATCTCCTATAACCTTGC CTTAGAGCAGCATATTAATGATACTTTTGATAGGCTTGATGTGCGGCTTTGGCATAATGCTATAGACCATATTATGGATA ATTTTTCACATCGCCCACCACAAGCAATAAATAATAATCTTTACAATATTAGTAATCCTAAACGCACAAATACAGGTGGT AGGGTAGAGGGGAGATTCTATTTTGGTGAGAATGTAGAGTTTTATGTGGGGAGTAATTATAACCACGATTCGCACGAGAG TCGCAATGGTGGAGGTGCGACTTTGCAAGATGCAAATAATGTGCTTAACCAAAAATACAATCCAAACTTTACTTTCAAAA ATCTAGGGTTTTTCACACAAGGGCAATATCATTCACAATCAAACTTTGGTATAGCCTTTGGTGCAAGATATGATTATCTT GTAACAGAACGAAAACAGCTAGCAGCACGAAGTGCAGCAGAGGATAAAAATAACCTTGCAAGTGCCTTTGTGCGATATGA ACATTATCTAGATAAATCCACATTATATGCGGGATTAGGTGTAGCGCAGAGAGGAGCGGACTTTTGGGAGCGAAGTAAGG CTAATGGTATGAATCTTTCACCAGAAACAAATACCCAGTTTGATGTGGGGCTTACTTATCAAGACGATGCATTTAAGAGT AAGGTTTCAGCCTATGCTTCGCATATGGCAAATTATATTTTAATCAACTATATTCCAGCAACAGCAAGTGCTTTTAATAC CGATGCTTTTCTTGCAGGTGGGGAGGTAGAAGCAGAGTATATTGTGTGGGATAGTTTGCACTTCTATGGTTCACTTGCTT ATACTTATGGTTTAAATCTAAGTACCAAACAAGGCTTACAATCTCATTCACCACTTCCACAAGTCGCCCCACTTCAGGCT CAAATCTCAAGCTTTTATGAGAATGGCAATTGGCTTTTACGCCTTGATGTAATTGCAAACGCCGTACAAAATCGTTATGC ATTTAATTATGGTAATGTGGTGGGTAAGGATTTAGGGAATTCTAAAGGATTTGTAACGCTTAATCTTTATGGAGGCTACA AACATAAATATTTTATGCTTCTAGCAGGAGTAGATAATCTCACAAATACACTTTATGCTTATCATCTCTCTAAAAATGGC ATAGACATTGGAGCATTAGATATTGCGCCCACAACTAGAATCTATGAGCCAGGACGCAGTATATGGACAAAAATGAGAGT GTATTTTTAA
Upstream 100 bases:
>100_bases TGCACACAATTCAAATTTGTTTTTTTTTGCAATAATGTCTAGAAATTAATTTGGGTTGGAGAGTTTTATGGGAAAAATTT ATGTTTCTATGGGAGTAGCG
Downstream 100 bases:
>100_bases GCAGAATTTAAGGGGGGTATAATATCGCTTTTAGTAAGAATCTAAGGAGATTTTGATGAAAAAGCGATATTATATATTTT ATGCTTTAGTAACTGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Protein OprC; Outer Membrane Protein; Outer Membrane Protein OprC Complement; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Protein; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MLFSTFAYADNILESAANERSNTSRGIVENKRVLPKSVVKAVFSKDLQSTTNITWQGKDTILHSGDIAKSMLQVPGFSMT RKGGGGSEVIFRSQVASRLPIFLNSGVLNGACGGRMDTTTTYIFPENYNRITFLKGPQDVRYGALISGGLLFERDILRLG KGSFNVDTSAMYGSFNRFDINANALAGGKYGSLQAIVSHYESADYRAGDRRIVHSAYNRESASLIGTFTPTSSTALEFDI DIGRGWASYADRAMDARTFDRISYNLALEQHINDTFDRLDVRLWHNAIDHIMDNFSHRPPQAINNNLYNISNPKRTNTGG RVEGRFYFGENVEFYVGSNYNHDSHESRNGGGATLQDANNVLNQKYNPNFTFKNLGFFTQGQYHSQSNFGIAFGARYDYL VTERKQLAARSAAEDKNNLASAFVRYEHYLDKSTLYAGLGVAQRGADFWERSKANGMNLSPETNTQFDVGLTYQDDAFKS KVSAYASHMANYILINYIPATASAFNTDAFLAGGEVEAEYIVWDSLHFYGSLAYTYGLNLSTKQGLQSHSPLPQVAPLQA QISSFYENGNWLLRLDVIANAVQNRYAFNYGNVVGKDLGNSKGFVTLNLYGGYKHKYFMLLAGVDNLTNTLYAYHLSKNG IDIGALDIAPTTRIYEPGRSIWTKMRVYF
Sequences:
>Translated_669_residues MLFSTFAYADNILESAANERSNTSRGIVENKRVLPKSVVKAVFSKDLQSTTNITWQGKDTILHSGDIAKSMLQVPGFSMT RKGGGGSEVIFRSQVASRLPIFLNSGVLNGACGGRMDTTTTYIFPENYNRITFLKGPQDVRYGALISGGLLFERDILRLG KGSFNVDTSAMYGSFNRFDINANALAGGKYGSLQAIVSHYESADYRAGDRRIVHSAYNRESASLIGTFTPTSSTALEFDI DIGRGWASYADRAMDARTFDRISYNLALEQHINDTFDRLDVRLWHNAIDHIMDNFSHRPPQAINNNLYNISNPKRTNTGG RVEGRFYFGENVEFYVGSNYNHDSHESRNGGGATLQDANNVLNQKYNPNFTFKNLGFFTQGQYHSQSNFGIAFGARYDYL VTERKQLAARSAAEDKNNLASAFVRYEHYLDKSTLYAGLGVAQRGADFWERSKANGMNLSPETNTQFDVGLTYQDDAFKS KVSAYASHMANYILINYIPATASAFNTDAFLAGGEVEAEYIVWDSLHFYGSLAYTYGLNLSTKQGLQSHSPLPQVAPLQA QISSFYENGNWLLRLDVIANAVQNRYAFNYGNVVGKDLGNSKGFVTLNLYGGYKHKYFMLLAGVDNLTNTLYAYHLSKNG IDIGALDIAPTTRIYEPGRSIWTKMRVYF >Mature_669_residues MLFSTFAYADNILESAANERSNTSRGIVENKRVLPKSVVKAVFSKDLQSTTNITWQGKDTILHSGDIAKSMLQVPGFSMT RKGGGGSEVIFRSQVASRLPIFLNSGVLNGACGGRMDTTTTYIFPENYNRITFLKGPQDVRYGALISGGLLFERDILRLG KGSFNVDTSAMYGSFNRFDINANALAGGKYGSLQAIVSHYESADYRAGDRRIVHSAYNRESASLIGTFTPTSSTALEFDI DIGRGWASYADRAMDARTFDRISYNLALEQHINDTFDRLDVRLWHNAIDHIMDNFSHRPPQAINNNLYNISNPKRTNTGG RVEGRFYFGENVEFYVGSNYNHDSHESRNGGGATLQDANNVLNQKYNPNFTFKNLGFFTQGQYHSQSNFGIAFGARYDYL VTERKQLAARSAAEDKNNLASAFVRYEHYLDKSTLYAGLGVAQRGADFWERSKANGMNLSPETNTQFDVGLTYQDDAFKS KVSAYASHMANYILINYIPATASAFNTDAFLAGGEVEAEYIVWDSLHFYGSLAYTYGLNLSTKQGLQSHSPLPQVAPLQA QISSFYENGNWLLRLDVIANAVQNRYAFNYGNVVGKDLGNSKGFVTLNLYGGYKHKYFMLLAGVDNLTNTLYAYHLSKNG IDIGALDIAPTTRIYEPGRSIWTKMRVYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74526; Mature: 74526
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSTFAYADNILESAANERSNTSRGIVENKRVLPKSVVKAVFSKDLQSTTNITWQGKDT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCE ILHSGDIAKSMLQVPGFSMTRKGGGGSEVIFRSQVASRLPIFLNSGVLNGACGGRMDTTT EEECCHHHHHHHHCCCCCEEECCCCCCCEEEHHHHHHCCCEEEECCCCCCCCCCCCCCCE TYIFPENYNRITFLKGPQDVRYGALISGGLLFERDILRLGKGSFNVDTSAMYGSFNRFDI EEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHCCCEEEEC NANALAGGKYGSLQAIVSHYESADYRAGDRRIVHSAYNRESASLIGTFTPTSSTALEFDI CCCEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEE DIGRGWASYADRAMDARTFDRISYNLALEQHINDTFDRLDVRLWHNAIDHIMDNFSHRPP ECCCCHHHHHHHHHCHHHHHHHEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC QAINNNLYNISNPKRTNTGGRVEGRFYFGENVEFYVGSNYNHDSHESRNGGGATLQDANN HHHCCCCEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH VLNQKYNPNFTFKNLGFFTQGQYHSQSNFGIAFGARYDYLVTERKQLAARSAAEDKNNLA HHCCCCCCCEEEECCCCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHHHHH SAFVRYEHYLDKSTLYAGLGVAQRGADFWERSKANGMNLSPETNTQFDVGLTYQDDAFKS HHHHHHHHHHCHHHHHHCCCHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHH KVSAYASHMANYILINYIPATASAFNTDAFLAGGEVEAEYIVWDSLHFYGSLAYTYGLNL HHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCEEEEEEEEECHHHHEEEEEEEECCC STKQGLQSHSPLPQVAPLQAQISSFYENGNWLLRLDVIANAVQNRYAFNYGNVVGKDLGN CHHHCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCEEECCCCCHHHCCCC SKGFVTLNLYGGYKHKYFMLLAGVDNLTNTLYAYHLSKNGIDIGALDIAPTTRIYEPGRS CCCEEEEEEECCCCEEEEEEEECCCHHHCEEEEEEECCCCCEEEEEECCCCCEEECCCHH IWTKMRVYF HHHEEEECC >Mature Secondary Structure MLFSTFAYADNILESAANERSNTSRGIVENKRVLPKSVVKAVFSKDLQSTTNITWQGKDT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCE ILHSGDIAKSMLQVPGFSMTRKGGGGSEVIFRSQVASRLPIFLNSGVLNGACGGRMDTTT EEECCHHHHHHHHCCCCCEEECCCCCCCEEEHHHHHHCCCEEEECCCCCCCCCCCCCCCE TYIFPENYNRITFLKGPQDVRYGALISGGLLFERDILRLGKGSFNVDTSAMYGSFNRFDI EEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHCCCEEEEC NANALAGGKYGSLQAIVSHYESADYRAGDRRIVHSAYNRESASLIGTFTPTSSTALEFDI CCCEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEE DIGRGWASYADRAMDARTFDRISYNLALEQHINDTFDRLDVRLWHNAIDHIMDNFSHRPP ECCCCHHHHHHHHHCHHHHHHHEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC QAINNNLYNISNPKRTNTGGRVEGRFYFGENVEFYVGSNYNHDSHESRNGGGATLQDANN HHHCCCCEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH VLNQKYNPNFTFKNLGFFTQGQYHSQSNFGIAFGARYDYLVTERKQLAARSAAEDKNNLA HHCCCCCCCEEEECCCCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHHHHH SAFVRYEHYLDKSTLYAGLGVAQRGADFWERSKANGMNLSPETNTQFDVGLTYQDDAFKS HHHHHHHHHHCHHHHHHCCCHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHH KVSAYASHMANYILINYIPATASAFNTDAFLAGGEVEAEYIVWDSLHFYGSLAYTYGLNL HHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCEEEEEEEEECHHHHEEEEEEEECCC STKQGLQSHSPLPQVAPLQAQISSFYENGNWLLRLDVIANAVQNRYAFNYGNVVGKDLGN CHHHCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCEEECCCCCHHHCCCC SKGFVTLNLYGGYKHKYFMLLAGVDNLTNTLYAYHLSKNGIDIGALDIAPTTRIYEPGRS CCCEEEEEEECCCCEEEEEEEECCCHHHCEEEEEEECCCCCEEEEEECCCCCEEECCCHH IWTKMRVYF HHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA