| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is engA
Identifier: 32267038
GI number: 32267038
Start: 1475123
End: 1476586
Strand: Direct
Name: engA
Synonym: HH1539
Alternate gene names: 32267038
Gene position: 1475123-1476586 (Clockwise)
Preceding gene: 32267037
Following gene: 32267040
Centisome position: 81.99
GC content: 37.02
Gene sequence:
>1464_bases ATGAAAACAATTGCAATTTTGGGCAAACCCAATGTAGGCAAAAGCTCCCTTTTTAATCGACTTATCAAGCAACATTTAGC TATCACTTCAGATGTAAGTGGGACAACGCGTGATGTAAAAAGAGCGTGTTTTGATATAAGTGGCGTAGAAGTAGAACTAC TTGATACAGGTGGAATTGATAAGGCAGAGGGTTTATTTGCCAAAGTATCTGCCAATTCGCTAAAAGCAGGGCAAGAGGCA GATTTGGTTTTATATATGGTTGATGGGAATGTTGTGCCTCAAGATGATGATATTGCATATTTTCGCACAATTCAAAAGGC TAAAAAACCGCTTGTGCTTGTTATCAATAAGGTTGATAATGATAAAATCAAGCAACAAGCGTGGGATTTTGCGTGTTTTG GTGCAGAACAGATGTATTTTATTTCTGTGCATCACAATCGTGGGTTAAGTATTTTGCTTGAAGCTATTTTTGAACTCCTC TCTCTTGCAAAGGAGCAATCTTTAAGTAATAATTTGCGCTCACAAATGGATAACGAAGAGATTGATGAGAGTTTAGAGGA GTTTTTGGGTATTTTAGAATCTACTCCAAATAAGAGTGAGGAAAACATTGCTGTTGGGATTATTGGACGCGTAAATGTAG GCAAAAGCTCCCTCTTAAATGCACTTTTGGGTAAAGAGAGAAGTGTAGTAAGTGAAGTGGCTGGAACGACTATTGATCCT GTAGATGATGAAATGGATATAGAGGGCAAAAGAGTAAGATTTGTGGATACGGCAGGGATTAGACGCGCGAGTAAGATTTG GGGGATTGAAAAATTTGCACTTTTACGCACAAATGCAGCACTTGCCCAAAGTCATATTGTGATTTTAGTTCTTGATGCGA GCGAAAGTTTTGTTGAATTAGATGAAAAAATTAGCTCTCTTATTCCTAAACACGCTTTGGGAGTGATTGTTGTGCTAAAT AAATGGGACAAAAAGCATAAGGAATATAAAGAAATCATCAAAGAATTTAAGCATAGATTCCCATTTCTTTCTTTCGCTCC AGTGATGACATTGAGTGCTCTTAATGGGCGTAATATTGATAAACTTAAAAAGGAAATTTTGAAGGTTTATCAGCGTTTTG CATATAGAATCCCTACAAGTGCGCTTAATGATGTTATCGCTCAAGCAGTAGCACATCATCATATTCCAAGCGATCACGGC AAGATTGTCAAAATTTATTATGCTACGCAATATGCCACACATCCGCCACAAATTGCGCTTGTGAGCAATCGCCCAGAAAG TTTGCATTTTAGCTACAAGCGATATATTATCAATATGTTAAGGGAGCAATTTGATTTTGAAGGTGTGCCAATTTTATTAA GTGTAAAGGGCAAAAATGCCAAAGATGAGGAAAATACATCTGCAAAAAAAGAATCTCCAAGTAAAGTATCGCATAGAGAA TCTAAAAATCGCAGATTTGTATAA
Upstream 100 bases:
>100_bases CGAAATTATCAAAAAGTTATTTTATCAATCTAAAATCCAACTTTAATCCAACTTTGGCTAAGATGTCTTGTAAAAATATT TTATCAAATAGAGAATCTCA
Downstream 100 bases:
>100_bases GAAATTTCTATAATTTATTTTATACCACAAAAATCTTTAATTGCTTCAACTTTATCTGTTTTTTCCCAGCTAAATTCGTT TAATTCGCGTCCAAAATGTC
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MKTIAILGKPNVGKSSLFNRLIKQHLAITSDVSGTTRDVKRACFDISGVEVELLDTGGIDKAEGLFAKVSANSLKAGQEA DLVLYMVDGNVVPQDDDIAYFRTIQKAKKPLVLVINKVDNDKIKQQAWDFACFGAEQMYFISVHHNRGLSILLEAIFELL SLAKEQSLSNNLRSQMDNEEIDESLEEFLGILESTPNKSEENIAVGIIGRVNVGKSSLLNALLGKERSVVSEVAGTTIDP VDDEMDIEGKRVRFVDTAGIRRASKIWGIEKFALLRTNAALAQSHIVILVLDASESFVELDEKISSLIPKHALGVIVVLN KWDKKHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNIDKLKKEILKVYQRFAYRIPTSALNDVIAQAVAHHHIPSDHG KIVKIYYATQYATHPPQIALVSNRPESLHFSYKRYIINMLREQFDFEGVPILLSVKGKNAKDEENTSAKKESPSKVSHRE SKNRRFV
Sequences:
>Translated_487_residues MKTIAILGKPNVGKSSLFNRLIKQHLAITSDVSGTTRDVKRACFDISGVEVELLDTGGIDKAEGLFAKVSANSLKAGQEA DLVLYMVDGNVVPQDDDIAYFRTIQKAKKPLVLVINKVDNDKIKQQAWDFACFGAEQMYFISVHHNRGLSILLEAIFELL SLAKEQSLSNNLRSQMDNEEIDESLEEFLGILESTPNKSEENIAVGIIGRVNVGKSSLLNALLGKERSVVSEVAGTTIDP VDDEMDIEGKRVRFVDTAGIRRASKIWGIEKFALLRTNAALAQSHIVILVLDASESFVELDEKISSLIPKHALGVIVVLN KWDKKHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNIDKLKKEILKVYQRFAYRIPTSALNDVIAQAVAHHHIPSDHG KIVKIYYATQYATHPPQIALVSNRPESLHFSYKRYIINMLREQFDFEGVPILLSVKGKNAKDEENTSAKKESPSKVSHRE SKNRRFV >Mature_487_residues MKTIAILGKPNVGKSSLFNRLIKQHLAITSDVSGTTRDVKRACFDISGVEVELLDTGGIDKAEGLFAKVSANSLKAGQEA DLVLYMVDGNVVPQDDDIAYFRTIQKAKKPLVLVINKVDNDKIKQQAWDFACFGAEQMYFISVHHNRGLSILLEAIFELL SLAKEQSLSNNLRSQMDNEEIDESLEEFLGILESTPNKSEENIAVGIIGRVNVGKSSLLNALLGKERSVVSEVAGTTIDP VDDEMDIEGKRVRFVDTAGIRRASKIWGIEKFALLRTNAALAQSHIVILVLDASESFVELDEKISSLIPKHALGVIVVLN KWDKKHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNIDKLKKEILKVYQRFAYRIPTSALNDVIAQAVAHHHIPSDHG KIVKIYYATQYATHPPQIALVSNRPESLHFSYKRYIINMLREQFDFEGVPILLSVKGKNAKDEENTSAKKESPSKVSHRE SKNRRFV
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=494, Percent_Identity=34.8178137651822, Blast_Score=264, Evalue=9e-72, Organism=Escherichia coli, GI1788919, Length=201, Percent_Identity=29.8507462686567, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI2367268, Length=122, Percent_Identity=38.5245901639344, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323665, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_HELHP (Q7VFY6)
Other databases:
- EMBL: AE017125 - RefSeq: NP_861070.1 - ProteinModelPortal: Q7VFY6 - SMR: Q7VFY6 - GeneID: 1492086 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1539 - NMPDR: fig|235279.1.peg.1539 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - BioCyc: HHEP235279:HH_1539-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 54563; Mature: 54563
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIAILGKPNVGKSSLFNRLIKQHLAITSDVSGTTRDVKRACFDISGVEVELLDTGGID CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC KAEGLFAKVSANSLKAGQEADLVLYMVDGNVVPQDDDIAYFRTIQKAKKPLVLVINKVDN CCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCC DKIKQQAWDFACFGAEQMYFISVHHNRGLSILLEAIFELLSLAKEQSLSNNLRSQMDNEE HHHHHHHHCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IDESLEEFLGILESTPNKSEENIAVGIIGRVNVGKSSLLNALLGKERSVVSEVAGTTIDP HHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCC VDDEMDIEGKRVRFVDTAGIRRASKIWGIEKFALLRTNAALAQSHIVILVLDASESFVEL CCCCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHCCHHHHCCCEEEEEECCCCHHHHH DEKISSLIPKHALGVIVVLNKWDKKHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNID HHHHHHHCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH KLKKEILKVYQRFAYRIPTSALNDVIAQAVAHHHIPSDHGKIVKIYYATQYATHPPQIAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEE VSNRPESLHFSYKRYIINMLREQFDFEGVPILLSVKGKNAKDEENTSAKKESPSKVSHRE ECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH SKNRRFV CCCCCCC >Mature Secondary Structure MKTIAILGKPNVGKSSLFNRLIKQHLAITSDVSGTTRDVKRACFDISGVEVELLDTGGID CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC KAEGLFAKVSANSLKAGQEADLVLYMVDGNVVPQDDDIAYFRTIQKAKKPLVLVINKVDN CCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCC DKIKQQAWDFACFGAEQMYFISVHHNRGLSILLEAIFELLSLAKEQSLSNNLRSQMDNEE HHHHHHHHCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IDESLEEFLGILESTPNKSEENIAVGIIGRVNVGKSSLLNALLGKERSVVSEVAGTTIDP HHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCC VDDEMDIEGKRVRFVDTAGIRRASKIWGIEKFALLRTNAALAQSHIVILVLDASESFVEL CCCCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHCCHHHHCCCEEEEEECCCCHHHHH DEKISSLIPKHALGVIVVLNKWDKKHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNID HHHHHHHCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH KLKKEILKVYQRFAYRIPTSALNDVIAQAVAHHHIPSDHGKIVKIYYATQYATHPPQIAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEE VSNRPESLHFSYKRYIINMLREQFDFEGVPILLSVKGKNAKDEENTSAKKESPSKVSHRE ECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH SKNRRFV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12810954