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The map label for this gene is glnM [H]

Identifier: 32266981

GI number: 32266981

Start: 1420990

End: 1421739

Strand: Direct

Name: glnM [H]

Synonym: HH1482

Alternate gene names: 32266981

Gene position: 1420990-1421739 (Clockwise)

Preceding gene: 32266980

Following gene: 32266982

Centisome position: 78.98

GC content: 37.87

Gene sequence:

>750_bases
GTGGATAGTGTAAGTTGGGTAGAGAATCTACGCACATTTTTGGAGTATATAGGCTTATATGATGAGGAAAGTTCCAGCCC
ATTTGCGATGTGGAAGTTTATTGACACTCTTGCTCAAAGTAACGAGTTTCTTTCTGGCTTTGGTTATACTTTGAGTGTGA
GCATTTTAGCTTTGCTTATAGCACTTATATTTGGCACGATTGGTGGTGTTATGGCGACAAGCAAGATTACAATTCTTCGT
GCTTACACACGAATGTATGTTGAGATTTTTCAAAATACACCTTTAGTGATACAGATATTTTTTCTCTACTTTGCCTTGCC
TCCGCTTGGAATCCATCTTGATGTTTTTAGTGTGGGTGTATTAGGAGTGGGTGCATATCACGGCGCTTATGTGAGTGAAG
TTGTCCGTAGCGGGATACTTGCTGTGCCTAAAGGACAATTTGAAGCCTCTGCTTCACAGGGCTTTACTTATACACAGCAA
ATGCGTTATATTATTTTGCCTCAAACTATTAAAATCATCTTGCCTCCAATCACTAATCAAGTAGTGAATCTTATTAAAAA
TACTTCTGTGCTTTTGATTATTGCAGGTGGGGAAATTATGTATGTAGCTGATAGTTATGCTGGAGATACAAGCAATTATG
CACCGGCATATCTTTTTGCGGCATTTTTATATTTTATCGTGTGCTATCCCTTAGCATATTTTGCGAAGTTTTATGAAGAT
AGACTTAAAACTGCTCACTTAAAGCGATAA

Upstream 100 bases:

>100_bases
CCAAAAAAAGATAAAGAATTCGCGGCTTTTATTGATACATTTGTAAAAAAGAATAAAGCACAAATTGATGAATTAGCAAA
AAAGTGGGGCTTGTAATATC

Downstream 100 bases:

>100_bases
GGAAGATATTATGGGAAATGTATTTAATCAATCAAATCTTCATTTTTTACTTGATGGGCTTTATCTAACGCTTGTTGTGG
CATTAGCAACTTGTGTGATT

Product: putative ABC-type amino-acid transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDSVSWVENLRTFLEYIGLYDEESSSPFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLIALIFGTIGGVMATSKITILR
AYTRMYVEIFQNTPLVIQIFFLYFALPPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQ
MRYIILPQTIKIILPPITNQVVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYED
RLKTAHLKR

Sequences:

>Translated_249_residues
MDSVSWVENLRTFLEYIGLYDEESSSPFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLIALIFGTIGGVMATSKITILR
AYTRMYVEIFQNTPLVIQIFFLYFALPPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQ
MRYIILPQTIKIILPPITNQVVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYED
RLKTAHLKR
>Mature_249_residues
MDSVSWVENLRTFLEYIGLYDEESSSPFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLIALIFGTIGGVMATSKITILR
AYTRMYVEIFQNTPLVIQIFFLYFALPPLGIHLDVFSVGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQ
MRYIILPQTIKIILPPITNQVVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYED
RLKTAHLKR

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=36.318407960199, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=28.9855072463768, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=29.064039408867, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1786874, Length=159, Percent_Identity=33.9622641509434, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=25.3588516746411, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=27.3584905660377, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=23.6842105263158, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787086, Length=179, Percent_Identity=27.3743016759777, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788646, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27803; Mature: 27803

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSVSWVENLRTFLEYIGLYDEESSSPFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLI
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH
ALIFGTIGGVMATSKITILRAYTRMYVEIFQNTPLVIQIFFLYFALPPLGIHLDVFSVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH
LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPITNQ
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCEEEEECCEEEEEECCHHHH
VVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYED
HHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKTAHLKR
HHHHHHCCC
>Mature Secondary Structure
MDSVSWVENLRTFLEYIGLYDEESSSPFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLI
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH
ALIFGTIGGVMATSKITILRAYTRMYVEIFQNTPLVIQIFFLYFALPPLGIHLDVFSVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH
LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPITNQ
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCEEEEECCEEEEEECCHHHH
VVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYED
HHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKTAHLKR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]