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The map label for this gene is ydhP [H]

Identifier: 32266953

GI number: 32266953

Start: 1399379

End: 1400545

Strand: Direct

Name: ydhP [H]

Synonym: HH1454

Alternate gene names: 32266953

Gene position: 1399379-1400545 (Clockwise)

Preceding gene: 32266952

Following gene: 32266958

Centisome position: 77.78

GC content: 43.44

Gene sequence:

>1167_bases
ATGATAAAAACAAATCCTCTTTTGCTTCCTACGCTAATGCTTGGTGTATTTGCGCTTTTGAGTATGGAGCTTGGAATGAT
GGGTGTGCTGCCTATCGTGGCGGAAGTCTATAATGTGAGTGTCGCAGACGCGGGGTGGGTTGTGAGTATTTTTGCACTCA
TTGTTGCGCTTGTCGCACCGATTTTACCCCCGCTTTTGACGAAGTATGACGCGAAAAAAGTTTTGCTATTTTGCCTGCTT
ATCTTTAGCGTTAGCTCGTTTTTGGCAGCCTTTTGCACAAATTTTATTGTGTTGCTTATCTTGCGTGCAATTCCAGCATT
TTTTCACCCTATCTTTTGCGCCTTTGCCTTTAGTATGGCAGCGGATTCTGTCCCACACAACGAATCCCCAAAGGCAATCG
CAAAGATTTTTATCGCTGTCTCTGCGGGTATGACGCTTGGGGTGCCGCTTACTAGCTTTATCGCAAGCAATACAAGCCTT
GAAATGTCTTTTATCTTTTTTGGTGCGCTTAACGCTCTAAGCCTCCTTGCCACACTTTTATTTATCCCAAATCAAAAGCA
AGAGCAAAAAGCTCCACAAAACGAGCAATTCAAGGTATTAGCAAAGCCCATAGTGTGGGTTTCTGTCATTGTTGTAATGC
TCCTAAATGGAGCAATGTTTGGCTTTTATAGCTATATGAGTGAGTTTTTGCTCCATTTCACGCAGGTTTCTTTTAATCTC
ATTAGCGCGCTTTTGCTTATCTATGGGCTAAGCAATGTCATCGGCAATTTCATTGCGGGTAAAAGCCTTGTGAGTGCGCC
CAATGCGACTTTAAGAATCGTGCCTTTAAGCCTCATTGTGTTATATAACGCACTCTTTTTTGGTGGGGGCAATGTTTGGG
GTGCAAGTGTGATTCTCATCATTCTTGGCATCTTTGCGGGGATTGGTAATAATATGGCGCAATTTGTCGTAACCTCGCCT
ATCCCAGAGGCAAAGGAACTCGCAAATGGACTTTTCATCAGTGCTGCAAATATCGGTATCACGCTTGGCACTTCGCTTTG
TGGGCTGTTTATCTCACTCAATGGCTCACGCTTTGCAGTTTTAGCGGCAGTGTGCTTGGTGGTTTTAAGCATTATATTTT
TAATGCTTAGAGGGCAGATTCTCATAAAAAGCAAGGAGACAAAGTGA

Upstream 100 bases:

>100_bases
TGCTTCATAATTTTAATATATTTTTTCTCCAACCCCTTGACAAACACCAAGTATCAGGCTTTATAATGTCAATTTTATTA
TTTCAAACAAAGGAATCTAA

Downstream 100 bases:

>100_bases
AAGACAAGGATAAAAAGAAATAAAAAGTTTTTGAGGAGAGGAGATTCTAAGCAAGATGAAATCTTTGCTACACAGAAGTT
ATTTTTGGCTTGCTTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MIKTNPLLLPTLMLGVFALLSMELGMMGVLPIVAEVYNVSVADAGWVVSIFALIVALVAPILPPLLTKYDAKKVLLFCLL
IFSVSSFLAAFCTNFIVLLILRAIPAFFHPIFCAFAFSMAADSVPHNESPKAIAKIFIAVSAGMTLGVPLTSFIASNTSL
EMSFIFFGALNALSLLATLLFIPNQKQEQKAPQNEQFKVLAKPIVWVSVIVVMLLNGAMFGFYSYMSEFLLHFTQVSFNL
ISALLLIYGLSNVIGNFIAGKSLVSAPNATLRIVPLSLIVLYNALFFGGGNVWGASVILIILGIFAGIGNNMAQFVVTSP
IPEAKELANGLFISAANIGITLGTSLCGLFISLNGSRFAVLAAVCLVVLSIIFLMLRGQILIKSKETK

Sequences:

>Translated_388_residues
MIKTNPLLLPTLMLGVFALLSMELGMMGVLPIVAEVYNVSVADAGWVVSIFALIVALVAPILPPLLTKYDAKKVLLFCLL
IFSVSSFLAAFCTNFIVLLILRAIPAFFHPIFCAFAFSMAADSVPHNESPKAIAKIFIAVSAGMTLGVPLTSFIASNTSL
EMSFIFFGALNALSLLATLLFIPNQKQEQKAPQNEQFKVLAKPIVWVSVIVVMLLNGAMFGFYSYMSEFLLHFTQVSFNL
ISALLLIYGLSNVIGNFIAGKSLVSAPNATLRIVPLSLIVLYNALFFGGGNVWGASVILIILGIFAGIGNNMAQFVVTSP
IPEAKELANGLFISAANIGITLGTSLCGLFISLNGSRFAVLAAVCLVVLSIIFLMLRGQILIKSKETK
>Mature_388_residues
MIKTNPLLLPTLMLGVFALLSMELGMMGVLPIVAEVYNVSVADAGWVVSIFALIVALVAPILPPLLTKYDAKKVLLFCLL
IFSVSSFLAAFCTNFIVLLILRAIPAFFHPIFCAFAFSMAADSVPHNESPKAIAKIFIAVSAGMTLGVPLTSFIASNTSL
EMSFIFFGALNALSLLATLLFIPNQKQEQKAPQNEQFKVLAKPIVWVSVIVVMLLNGAMFGFYSYMSEFLLHFTQVSFNL
ISALLLIYGLSNVIGNFIAGKSLVSAPNATLRIVPLSLIVLYNALFFGGGNVWGASVILIILGIFAGIGNNMAQFVVTSP
IPEAKELANGLFISAANIGITLGTSLCGLFISLNGSRFAVLAAVCLVVLSIIFLMLRGQILIKSKETK

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=303, Percent_Identity=28.0528052805281, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1786595, Length=287, Percent_Identity=26.8292682926829, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI145693198, Length=320, Percent_Identity=23.75, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787808, Length=365, Percent_Identity=27.6712328767123, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41571; Mature: 41571

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCEEEECCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]