| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is cysC
Identifier: 32266937
GI number: 32266937
Start: 1383594
End: 1384199
Strand: Direct
Name: cysC
Synonym: HH1438
Alternate gene names: 32266937
Gene position: 1383594-1384199 (Clockwise)
Preceding gene: 32266936
Following gene: 32266938
Centisome position: 76.9
GC content: 35.97
Gene sequence:
>606_bases ATGCAAAATCAATCCATACAATCAAAACAAACTTCACAACAAGACAATCAACAAACAAGCACAATGTGTTCAAAGCAACA AGGCGCAGTTATTTGGATTTGTGGATTGGCAGGAGCAGGGAAAACGACTATTGCCAAAGAAATTTTTACGCTTTTAGAGC AAAAATACTCTAATGTAATATTTTTAGATGGCGATGAGTTTAGAGAGATTTTTGGACGCAGTGGCTTTAGCAAAGAGGAG CGCTTAGAAGTCGCAAGATTGATTGCAAAATTATGTGTTTTTCTCTCAAAGAGTGGTTTAATCGTAGTGTGCGCAACCAT TTCGCTTTTTGATGAGATTTATGCTTTCAATCGCTCGCATATCGCGCGTTATTTTGAAGTTTTTGTAGAGTGTTCTATGG AGGAGTTATTAAGACGAGATAAAAAAGCCTTGTATTCTCAAGCTCTCAAGGGAGATATAAAAGATGTTATAGGCATAGAT TTAACCTATGATACGCCTAAAGCGCATTATGTGCTTCAAAACAACACCGCCGATAAGTTAGATTCTAAAGTGAAGGAACT TTATAACGCAGTAGAAAAGTTTTTAATACAAAAAGGAGCAAAATAA
Upstream 100 bases:
>100_bases TTGCGATGATGTGGCATATTGAACGCGCTCCAAAAATGGGAGAAAATATATTATTTAATCAATGGAAAATTGGGGTAGAA TCTCAATCAAAGGAGTAGCT
Downstream 100 bases:
>100_bases TGAAAGCAATTATTCTAGCGGCGGGATTTGGTTCAAGGCTAATGCCTTTGACACAAGAGAATCCAAAGTGTATGGTGGAA TATCACGGCAAAAAGCTCAT
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQNQSIQSKQTSQQDNQQTSTMCSKQQGAVIWICGLAGAGKTTIAKEIFTLLEQKYSNVIFLDGDEFREIFGRSGFSKEE RLEVARLIAKLCVFLSKSGLIVVCATISLFDEIYAFNRSHIARYFEVFVECSMEELLRRDKKALYSQALKGDIKDVIGID LTYDTPKAHYVLQNNTADKLDSKVKELYNAVEKFLIQKGAK
Sequences:
>Translated_201_residues MQNQSIQSKQTSQQDNQQTSTMCSKQQGAVIWICGLAGAGKTTIAKEIFTLLEQKYSNVIFLDGDEFREIFGRSGFSKEE RLEVARLIAKLCVFLSKSGLIVVCATISLFDEIYAFNRSHIARYFEVFVECSMEELLRRDKKALYSQALKGDIKDVIGID LTYDTPKAHYVLQNNTADKLDSKVKELYNAVEKFLIQKGAK >Mature_201_residues MQNQSIQSKQTSQQDNQQTSTMCSKQQGAVIWICGLAGAGKTTIAKEIFTLLEQKYSNVIFLDGDEFREIFGRSGFSKEE RLEVARLIAKLCVFLSKSGLIVVCATISLFDEIYAFNRSHIARYFEVFVECSMEELLRRDKKALYSQALKGDIKDVIGID LTYDTPKAHYVLQNNTADKLDSKVKELYNAVEKFLIQKGAK
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=185, Percent_Identity=30.8108108108108, Blast_Score=87, Evalue=9e-18, Organism=Homo sapiens, GI62912492, Length=182, Percent_Identity=33.5164835164835, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI34447231, Length=182, Percent_Identity=33.5164835164835, Blast_Score=84, Evalue=8e-17, Organism=Escherichia coli, GI1789107, Length=154, Percent_Identity=30.5194805194805, Blast_Score=83, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17542422, Length=171, Percent_Identity=32.7485380116959, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322852, Length=151, Percent_Identity=35.7615894039735, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI116007838, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24667044, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24667040, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24667032, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24667028, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24667036, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22758; Mature: 22758
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQSIQSKQTSQQDNQQTSTMCSKQQGAVIWICGLAGAGKTTIAKEIFTLLEQKYSNVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEE FLDGDEFREIFGRSGFSKEERLEVARLIAKLCVFLSKSGLIVVCATISLFDEIYAFNRSH EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH IARYFEVFVECSMEELLRRDKKALYSQALKGDIKDVIGIDLTYDTPKAHYVLQNNTADKL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHH DSKVKELYNAVEKFLIQKGAK HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQNQSIQSKQTSQQDNQQTSTMCSKQQGAVIWICGLAGAGKTTIAKEIFTLLEQKYSNVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEE FLDGDEFREIFGRSGFSKEERLEVARLIAKLCVFLSKSGLIVVCATISLFDEIYAFNRSH EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH IARYFEVFVECSMEELLRRDKKALYSQALKGDIKDVIGIDLTYDTPKAHYVLQNNTADKL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHH DSKVKELYNAVEKFLIQKGAK HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]