Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266904

Identifier: 32266904

GI number: 32266904

Start: 1344048

End: 1345619

Strand: Direct

Name: 32266904

Synonym: HH1405

Alternate gene names: NA

Gene position: 1344048-1345619 (Clockwise)

Preceding gene: 32266903

Following gene: 32266905

Centisome position: 74.7

GC content: 38.3

Gene sequence:

>1572_bases
ATGAAAACACTAGAGGATCTCAAGGCGATGAGTCAAGAACAAAAAGAAAAATTAAAATCTAAGTTGTTTAGTGCGGTGAG
AAACAATAATTTGGATAGCGTGAGTGAGTTTTTCAAGGTTTATCCTGTGAAAGAAACTTTCTATGAAAAGTGCTTCGAGT
ATAATGAATCTTTCCTCGATCCTGTGGAACTTTTAGCTTGTGCGGGAAATAGCTCTAGTAAAAATTTTGCAATGCTTGAA
CTCCTTGAAAAGTGCGGACTAAGGGCAGATTATGAATATCGTGGTGATAATGCGCTTCTTGCGTATATTGACCTTGAGGG
GAAAAAGAGAGAATCTGTGATTGAATACTTTTTAAACAAGGGCGCGAAGTGGGAAGTCTATGGCAGGAATGGTGAGACAA
AATTGCATTTTTGGGCGAAGATGAATGAGGCACCTAATCTTGAATTTGCCCTCAAATATGGTGCGAATCCAAATGTGAAA
AATATCCCGCCAACTCTAAGCGATGGCTGGGATTTGGGTGGTAAAAATATCGGAGCTACGCCTTTGATGTATGCTGGAAA
TTCTACATTCGCCCGTGAAGCACCAATGGGAGCTAGCATACAGCTGCTACTCAAGTATGGGGCGGAGGTCAATGCGGTGG
GCTATATGGAAAAAAGCCACAAAGTTGAAAGGAATGGTAAAAGGATACTTGAAGGTAGAGGTGAGTATAGTGAGCCTCAA
TCTGTGCTGGATTATTGTGATGTGGCACAGAATGAGGAACTTTTAAAAGCAGCAGGTGCGCGGAGCTGGGAACAGCTTAT
CAAGGAATATAATATCGATACGACTCTTACTGTGCCTGAACAGGTGAGAATCTACTATGAGCGTTTGGAGGATAAGAGCT
ATCAAAAAACGCCCATAGAGATTGACGATGAAAAGCCAAAAACGCCAAAAACACTAAGAGATATTCACAAAGATGAGGAA
TATTTTGATAGGTATATTAGGGCGGAAGAGAAGTTTTTGAAAAAATACAATGAGAGCCATAATATTTACAGCGAAAACTT
TTGCATAGCAACGGCAATGTATTCTAGGGGTGATGATATAGAATCTATAAAGCAAGTCTTTGTAAAAAGTCTCAATGAAT
GGAAAAATAATTTTGATATAAGTGATTACACTACAAATACTGAAAAACTTGCTGTGATGATTCTGTGCGATATGAATACT
TCTTGGGTATTAGAGCAGCTTAATGTGAACGAGAGGGAAAAGGAGGACACATATTATGATGATTGGTTGCTTCATTTTCT
AGCGAGTAAGGGAGCGGAAAAGGACTTTTCAAAAATGGCGCAAAGTCTCAAAAAATACGATACGCTTAAGCTTTTTATTG
AAACCAAAGAGAGCGATTATTTTAAAACCTATCTTAAGCAATGGTATAGCAAAAGCAGAGGTGATGCTTGGTGGGGAGAT
CATAAATATCCTGACGAGAGATTAGTTTATAGTGGATATTGGAATTATGAAGGAGCAGCTGTTTTAAAAATCTTAGGTGT
AGATAAAGAAGAATTTAAAGGCTATAAATATTTCCCGTATGATTTGATATAG

Upstream 100 bases:

>100_bases
TTTATTGTTATGCGTGATATATCAAATCAAAAAGCAAAAGCCTTGATATTATCTGCATATTCAATTCATAGTTGCAGAAT
ATTTAACCAAAGGAGACACA

Downstream 100 bases:

>100_bases
GTTTGTTGTATAAATATGTTAAGTTTTGGGCACAAGGAGAGGGAATGCGATATATTATAAGTTTGGTTATATCTGTGGCA
TTAGTGTGTGCAAGTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE
LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK
NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ
SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE
YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT
SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD
HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI

Sequences:

>Translated_523_residues
MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE
LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK
NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ
SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE
YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT
SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD
HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI
>Mature_523_residues
MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE
LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK
NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ
SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE
YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT
SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD
HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61026; Mature: 61026

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHCC
PVELLACAGNSSSKNFAMLELLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNK
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHCC
GAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVKNIPPTLSDGWDLGGKNIGAT
CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ
CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHCCCCCCCCHH
SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIE
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCE
IDDEKPKTPKTLRDIHKDEEYFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDI
ECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCH
ESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNTSWVLEQLNVNEREKEDTYYD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCHHH
DWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD
HHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI
CCCCCCCEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHCC
PVELLACAGNSSSKNFAMLELLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNK
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHCC
GAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVKNIPPTLSDGWDLGGKNIGAT
CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ
CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHCCCCCCCCHH
SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIE
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCE
IDDEKPKTPKTLRDIHKDEEYFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDI
ECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCH
ESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNTSWVLEQLNVNEREKEDTYYD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCHHH
DWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD
HHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI
CCCCCCCEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA