| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266904
Identifier: 32266904
GI number: 32266904
Start: 1344048
End: 1345619
Strand: Direct
Name: 32266904
Synonym: HH1405
Alternate gene names: NA
Gene position: 1344048-1345619 (Clockwise)
Preceding gene: 32266903
Following gene: 32266905
Centisome position: 74.7
GC content: 38.3
Gene sequence:
>1572_bases ATGAAAACACTAGAGGATCTCAAGGCGATGAGTCAAGAACAAAAAGAAAAATTAAAATCTAAGTTGTTTAGTGCGGTGAG AAACAATAATTTGGATAGCGTGAGTGAGTTTTTCAAGGTTTATCCTGTGAAAGAAACTTTCTATGAAAAGTGCTTCGAGT ATAATGAATCTTTCCTCGATCCTGTGGAACTTTTAGCTTGTGCGGGAAATAGCTCTAGTAAAAATTTTGCAATGCTTGAA CTCCTTGAAAAGTGCGGACTAAGGGCAGATTATGAATATCGTGGTGATAATGCGCTTCTTGCGTATATTGACCTTGAGGG GAAAAAGAGAGAATCTGTGATTGAATACTTTTTAAACAAGGGCGCGAAGTGGGAAGTCTATGGCAGGAATGGTGAGACAA AATTGCATTTTTGGGCGAAGATGAATGAGGCACCTAATCTTGAATTTGCCCTCAAATATGGTGCGAATCCAAATGTGAAA AATATCCCGCCAACTCTAAGCGATGGCTGGGATTTGGGTGGTAAAAATATCGGAGCTACGCCTTTGATGTATGCTGGAAA TTCTACATTCGCCCGTGAAGCACCAATGGGAGCTAGCATACAGCTGCTACTCAAGTATGGGGCGGAGGTCAATGCGGTGG GCTATATGGAAAAAAGCCACAAAGTTGAAAGGAATGGTAAAAGGATACTTGAAGGTAGAGGTGAGTATAGTGAGCCTCAA TCTGTGCTGGATTATTGTGATGTGGCACAGAATGAGGAACTTTTAAAAGCAGCAGGTGCGCGGAGCTGGGAACAGCTTAT CAAGGAATATAATATCGATACGACTCTTACTGTGCCTGAACAGGTGAGAATCTACTATGAGCGTTTGGAGGATAAGAGCT ATCAAAAAACGCCCATAGAGATTGACGATGAAAAGCCAAAAACGCCAAAAACACTAAGAGATATTCACAAAGATGAGGAA TATTTTGATAGGTATATTAGGGCGGAAGAGAAGTTTTTGAAAAAATACAATGAGAGCCATAATATTTACAGCGAAAACTT TTGCATAGCAACGGCAATGTATTCTAGGGGTGATGATATAGAATCTATAAAGCAAGTCTTTGTAAAAAGTCTCAATGAAT GGAAAAATAATTTTGATATAAGTGATTACACTACAAATACTGAAAAACTTGCTGTGATGATTCTGTGCGATATGAATACT TCTTGGGTATTAGAGCAGCTTAATGTGAACGAGAGGGAAAAGGAGGACACATATTATGATGATTGGTTGCTTCATTTTCT AGCGAGTAAGGGAGCGGAAAAGGACTTTTCAAAAATGGCGCAAAGTCTCAAAAAATACGATACGCTTAAGCTTTTTATTG AAACCAAAGAGAGCGATTATTTTAAAACCTATCTTAAGCAATGGTATAGCAAAAGCAGAGGTGATGCTTGGTGGGGAGAT CATAAATATCCTGACGAGAGATTAGTTTATAGTGGATATTGGAATTATGAAGGAGCAGCTGTTTTAAAAATCTTAGGTGT AGATAAAGAAGAATTTAAAGGCTATAAATATTTCCCGTATGATTTGATATAG
Upstream 100 bases:
>100_bases TTTATTGTTATGCGTGATATATCAAATCAAAAAGCAAAAGCCTTGATATTATCTGCATATTCAATTCATAGTTGCAGAAT ATTTAACCAAAGGAGACACA
Downstream 100 bases:
>100_bases GTTTGTTGTATAAATATGTTAAGTTTTGGGCACAAGGAGAGGGAATGCGATATATTATAAGTTTGGTTATATCTGTGGCA TTAGTGTGTGCAAGTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI
Sequences:
>Translated_523_residues MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI >Mature_523_residues MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLDPVELLACAGNSSSKNFAMLE LLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNKGAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVK NIPPTLSDGWDLGGKNIGATPLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIEIDDEKPKTPKTLRDIHKDEE YFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDIESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNT SWVLEQLNVNEREKEDTYYDDWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61026; Mature: 61026
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHCC PVELLACAGNSSSKNFAMLELLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNK HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHCC GAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVKNIPPTLSDGWDLGGKNIGAT CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHCCCCCCCCHH SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIE HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCE IDDEKPKTPKTLRDIHKDEEYFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDI ECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCH ESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNTSWVLEQLNVNEREKEDTYYD HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCHHH DWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD HHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI CCCCCCCEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCC >Mature Secondary Structure MKTLEDLKAMSQEQKEKLKSKLFSAVRNNNLDSVSEFFKVYPVKETFYEKCFEYNESFLD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHCC PVELLACAGNSSSKNFAMLELLEKCGLRADYEYRGDNALLAYIDLEGKKRESVIEYFLNK HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHCC GAKWEVYGRNGETKLHFWAKMNEAPNLEFALKYGANPNVKNIPPTLSDGWDLGGKNIGAT CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PLMYAGNSTFAREAPMGASIQLLLKYGAEVNAVGYMEKSHKVERNGKRILEGRGEYSEPQ CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHCCCCCCCCHH SVLDYCDVAQNEELLKAAGARSWEQLIKEYNIDTTLTVPEQVRIYYERLEDKSYQKTPIE HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCE IDDEKPKTPKTLRDIHKDEEYFDRYIRAEEKFLKKYNESHNIYSENFCIATAMYSRGDDI ECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCH ESIKQVFVKSLNEWKNNFDISDYTTNTEKLAVMILCDMNTSWVLEQLNVNEREKEDTYYD HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCHHH DWLLHFLASKGAEKDFSKMAQSLKKYDTLKLFIETKESDYFKTYLKQWYSKSRGDAWWGD HHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC HKYPDERLVYSGYWNYEGAAVLKILGVDKEEFKGYKYFPYDLI CCCCCCCEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA