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The map label for this gene is secY

Identifier: 32266896

GI number: 32266896

Start: 1338381

End: 1339631

Strand: Direct

Name: secY

Synonym: HH1397

Alternate gene names: 32266896

Gene position: 1338381-1339631 (Clockwise)

Preceding gene: 32266895

Following gene: 32266897

Centisome position: 74.39

GC content: 35.65

Gene sequence:

>1251_bases
ATGACAAGGAGCATTGTAAATAAGATTCTTATCACACTCGCTTTTTTACTTGCATATAGAATTTTGGCATATGTGCCTGT
GCCAGGTGTAGATGTGAGTATTATTAAATCATTTATTGATGATAATGCTAATAATGCACTTGGCTTATTTAATATGTTTA
GCGGTAATGCCGTGGAACGTTTTAGTATTATTTCTTTGGGAATTATGCCCTATATTACCGCTTCTATTATTATGGAGCTT
CTTGCAGCGACTTTCCCCAATCTTGCTAAAATGAAAAAAGAACGTGATGGTATGCAAAAATATATGCAAATCGTGCGTTA
TGTAACTATTGCTATTACGATTGTCCAAGCTGTGAGCGTAAGTATAGGGCTCAATAGTATGAGTGTCGGAGCAATTAAAA
TTGATTTAAATCTTTTTATTGCTATATCAGTTTTTTCAATGCTTACAGGGACAATGCTTCTTATGTGGATTGGAGAGCAA
ATCACACAACGAGGTGTGGGTAATGGGATTAGTCTTATTATTTTTGGTGGGATTGTGTCTTCAATTCCTTCAAATATAGG
AAAAACATTTAATCTTGTTAATACAGGACAAATTAATGTTTTTATGTTGCTTATTCTTCTTGCAGTGATTGTTATAACCG
TTGGAGTGATTATTTTCATAGAGCTTGCCGAGAGACGCATACCTGTTTCTTATGCGCGTAAGGTTGTTATGCAAAATCAA
AATAAGCGCATTATGAATTACATTCCTGTAAAAATGAATTTAAGTGGCGTTATTCCCCCTATTTTTGCCTCTGCGCTACT
TGTATTTCCCTCAACAATTTTGCAAGCATCATCAAATAGTATGATTCAAGCGGTTGCCGATATTTTAAAGCCTGATGGTT
ATATTTATAATTTGCTTATGTTTATTTTTGTCATATTTTTTGCCTTTTTTTATGCCTCTATTGTTTTTAATGCGAAGGAC
ATTGCAGATAATTTAAAAAGGCAAGGCGGTTTTATACCCGGTTTGCGTCCGGGAGAGGGCACAGCAAATTTTCTTAATAA
TGTTGCGAGTAATCTCACTTTTTGGGGTGCATTATATTTGGCTCTTGTTTCAACGCTTCCTTGGGTGCTTGTAAAACTTA
CAGGAGTTCCTTTTTATTTTGGTGGGACAGCGGTATTAATTGTCGTGCAAGTCGCTATTGATACGATGAGACGCATAGAA
GCCCAAATTTATATGAGTAAATATCAGACCCTAAGCGCCGTAGGGCTCTAA

Upstream 100 bases:

>100_bases
TTCCTAAGAATGTAGTGAAAGTAAAGCTTATTGGGAAAAAAGCAAAAGCTTTGATGTCTAAAATTAAAGATGAGTGCATT
AAAACAAGTGGAAGCAAAGA

Downstream 100 bases:

>100_bases
TATGGCGATAGGTATTAAAAGTAAGAAAGATATAGAATCTTTGCGCATACCTAATAAGATTGTTGCTCAAACACTTGAAC
TTCTACGTCTTGAAGCAAAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTRSIVNKILITLAFLLAYRILAYVPVPGVDVSIIKSFIDDNANNALGLFNMFSGNAVERFSIISLGIMPYITASIIMEL
LAATFPNLAKMKKERDGMQKYMQIVRYVTIAITIVQAVSVSIGLNSMSVGAIKIDLNLFIAISVFSMLTGTMLLMWIGEQ
ITQRGVGNGISLIIFGGIVSSIPSNIGKTFNLVNTGQINVFMLLILLAVIVITVGVIIFIELAERRIPVSYARKVVMQNQ
NKRIMNYIPVKMNLSGVIPPIFASALLVFPSTILQASSNSMIQAVADILKPDGYIYNLLMFIFVIFFAFFYASIVFNAKD
IADNLKRQGGFIPGLRPGEGTANFLNNVASNLTFWGALYLALVSTLPWVLVKLTGVPFYFGGTAVLIVVQVAIDTMRRIE
AQIYMSKYQTLSAVGL

Sequences:

>Translated_416_residues
MTRSIVNKILITLAFLLAYRILAYVPVPGVDVSIIKSFIDDNANNALGLFNMFSGNAVERFSIISLGIMPYITASIIMEL
LAATFPNLAKMKKERDGMQKYMQIVRYVTIAITIVQAVSVSIGLNSMSVGAIKIDLNLFIAISVFSMLTGTMLLMWIGEQ
ITQRGVGNGISLIIFGGIVSSIPSNIGKTFNLVNTGQINVFMLLILLAVIVITVGVIIFIELAERRIPVSYARKVVMQNQ
NKRIMNYIPVKMNLSGVIPPIFASALLVFPSTILQASSNSMIQAVADILKPDGYIYNLLMFIFVIFFAFFYASIVFNAKD
IADNLKRQGGFIPGLRPGEGTANFLNNVASNLTFWGALYLALVSTLPWVLVKLTGVPFYFGGTAVLIVVQVAIDTMRRIE
AQIYMSKYQTLSAVGL
>Mature_415_residues
TRSIVNKILITLAFLLAYRILAYVPVPGVDVSIIKSFIDDNANNALGLFNMFSGNAVERFSIISLGIMPYITASIIMELL
AATFPNLAKMKKERDGMQKYMQIVRYVTIAITIVQAVSVSIGLNSMSVGAIKIDLNLFIAISVFSMLTGTMLLMWIGEQI
TQRGVGNGISLIIFGGIVSSIPSNIGKTFNLVNTGQINVFMLLILLAVIVITVGVIIFIELAERRIPVSYARKVVMQNQN
KRIMNYIPVKMNLSGVIPPIFASALLVFPSTILQASSNSMIQAVADILKPDGYIYNLLMFIFVIFFAFFYASIVFNAKDI
ADNLKRQGGFIPGLRPGEGTANFLNNVASNLTFWGALYLALVSTLPWVLVKLTGVPFYFGGTAVLIVVQVAIDTMRRIEA
QIYMSKYQTLSAVGL

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=416, Percent_Identity=39.1826923076923, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 45606; Mature: 45475

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSIVNKILITLAFLLAYRILAYVPVPGVDVSIIKSFIDDNANNALGLFNMFSGNAVER
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHHHCCCCCHHH
FSIISLGIMPYITASIIMELLAATFPNLAKMKKERDGMQKYMQIVRYVTIAITIVQAVSV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIGLNSMSVGAIKIDLNLFIAISVFSMLTGTMLLMWIGEQITQRGVGNGISLIIFGGIVS
HCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SIPSNIGKTFNLVNTGQINVFMLLILLAVIVITVGVIIFIELAERRIPVSYARKVVMQNQ
HHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
NKRIMNYIPVKMNLSGVIPPIFASALLVFPSTILQASSNSMIQAVADILKPDGYIYNLLM
CCHHHHEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
FIFVIFFAFFYASIVFNAKDIADNLKRQGGFIPGLRPGEGTANFLNNVASNLTFWGALYL
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALVSTLPWVLVKLTGVPFYFGGTAVLIVVQVAIDTMRRIEAQIYMSKYQTLSAVGL
HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRSIVNKILITLAFLLAYRILAYVPVPGVDVSIIKSFIDDNANNALGLFNMFSGNAVER
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHHHCCCCCHHH
FSIISLGIMPYITASIIMELLAATFPNLAKMKKERDGMQKYMQIVRYVTIAITIVQAVSV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIGLNSMSVGAIKIDLNLFIAISVFSMLTGTMLLMWIGEQITQRGVGNGISLIIFGGIVS
HCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SIPSNIGKTFNLVNTGQINVFMLLILLAVIVITVGVIIFIELAERRIPVSYARKVVMQNQ
HHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
NKRIMNYIPVKMNLSGVIPPIFASALLVFPSTILQASSNSMIQAVADILKPDGYIYNLLM
CCHHHHEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
FIFVIFFAFFYASIVFNAKDIADNLKRQGGFIPGLRPGEGTANFLNNVASNLTFWGALYL
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALVSTLPWVLVKLTGVPFYFGGTAVLIVVQVAIDTMRRIEAQIYMSKYQTLSAVGL
HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]