| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is flgA
Identifier: 32266858
GI number: 32266858
Start: 1315724
End: 1316641
Strand: Direct
Name: flgA
Synonym: HH1359
Alternate gene names: NA
Gene position: 1315724-1316641 (Clockwise)
Preceding gene: 32266857
Following gene: 32266859
Centisome position: 73.13
GC content: 33.99
Gene sequence:
>918_bases ATGAAACAATTTTTTCTTTTTTTTGTCATTTTTGCGAATATAAATCTAATCGCAGATGATATTTCTATCCCTCCATCTAA ACTCTCATTGCAAAAGAGCTATCAAGTGAGCAAAAATAATATTTATTCAACAGATATATTTCCTCAAATAGATAAGCGTT TTAAGATTGCTACTCTACCTCCTGATAAATTCACTCTTAAACTTAAAAGTGTAGATATAAAGCTTATTTTTGCGCGCTAT GGATATGAGATTAGCTCTTTTGAGAGTGAATTTGTAGAATTTAATTTTGTAAGTGATATGCGCGAAGATAAGGCATTGGA TTTTATACAAAAAATGTATATTCAACATTATGGTAAAAGTCTCGAGATAAAAAAGCTACTCGTGCGTCCAATAGGCGTAT TGCCACAACAATATGAATTACTTGAGTATGAATTAGCACCTCCTGCATTAAAAAAAAACAACGGCACTTTTGTGATGAAG TATCGCACTGGAGAGCATTCACATATCAAAAAAATCACTTTTGCTTATATGCTTGAAGGAACGCTTGAAGTGCTTAAAAG CACGCAAAATATTAATGTTAATGATACTTTAACACCGCAAAATACGCGCGCAGAGCGTATCACTTTTGAGCGAGTAGGTG CAGAATACATTAGCACACAAGAGATTTATAATAGTGGAGCGAAGAGCTATATTCGCGTAGATACAGCTATTACAAAAGAT AAAATCAAGCCAAGAATCATCGTAAAAAAAGGAGATAAGATTCGTGTCTTTAGTCGTGAAGGTGGTATTACAACGGAAAT AGTCCTTGTGGCAAGACAAAATGCCGTGCACAATGAAATTATTAATGCCCAAAATCCAAATAGCGGGAAAATCATACGCG TAAAAATTACCGATGAAGGCAAGGGTGAAATTTTGTAA
Upstream 100 bases:
>100_bases TAGAATCTATAAAGGGTAAGGGAAGTCAGTGTCAGCTTAGGATTAATTTTTCCGGATTAGAGCGCGTGATTCTAGCTTCA TTTGTGCAAAAGGTATGCGA
Downstream 100 bases:
>100_bases GTGGTAAGCGTATTGATGATGTGGTATGATGATTAAAAAATTTAGGAGAGTATATGAGAGGAATCAAGAAGCTTGTAGTT GCTATAGGAGGAGCGAGCGG
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL
Sequences:
>Translated_305_residues MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL >Mature_305_residues MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35047; Mature: 35047
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLP CCHHEEEEEEHHCCEEEEECCCCCCCHHHHHHHHEECCCCEEECCCCCCCCCCEEEEECC PDKFTLKLKSVDIKLIFARYGYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKS CCCEEEEEEECEEEEEEEECCCCHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC LEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMKYRTGEHSHIKKITFAYMLEG CHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHH TLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD HHHHHHCCCCCCCCCCCCCCCCCHHEEEHHHHCHHHHHHHHHHCCCCCEEEEEEEEEHHC KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEG CCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEECCCC KGEIL CCCCC >Mature Secondary Structure MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLP CCHHEEEEEEHHCCEEEEECCCCCCCHHHHHHHHEECCCCEEECCCCCCCCCCEEEEECC PDKFTLKLKSVDIKLIFARYGYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKS CCCEEEEEEECEEEEEEEECCCCHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC LEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMKYRTGEHSHIKKITFAYMLEG CHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHH TLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD HHHHHHCCCCCCCCCCCCCCCCCHHEEEHHHHCHHHHHHHHHHCCCCCEEEEEEEEEHHC KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEG CCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEECCCC KGEIL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA