| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is engB
Identifier: 32266828
GI number: 32266828
Start: 1286457
End: 1287125
Strand: Direct
Name: engB
Synonym: HH1329
Alternate gene names: 32266828
Gene position: 1286457-1287125 (Clockwise)
Preceding gene: 32266827
Following gene: 32266829
Centisome position: 71.5
GC content: 35.28
Gene sequence:
>669_bases ATGGTTCAGGTTATAGAATCCCGCTTTATGAGCAGTGCAAGCCATTTAGATAATGCTCCACCACCAAATGCTTCGGAGAT AGTGTTTTTAGGACGAAGCAATGTGGGCAAAAGCACACTTATTAATACGCTCTTAAACAAACCTCTTGCAAAAAGCTCTT CTACGCCGGGTAAAACACAACTTATTAATTTTTTTGCATCTGTGTGGGTATGGCATAATCAAAGGTTGCCACTTACTTTT ATTGATTTGCCCGGTTTTGGCTATGCAAAAGTAAGTAAAACTATCAAAAAAGAATGGGAAAGGCATTTACTTAATTTTTT GTTTATGCGTCAATCTATCAAGCTTTTTTTGCATCTTGTTGATGCACGACATACAGATCTAGCTATTGATACATCTGTAG CTACAATGTTGGAACAAATATGTAGAGGCGACCAATGTATTTTAAGAATCTACACTAAAGCCGATAAGCTTAATCAGTCT GCACTTAATGCTTTATATAAGAGAGTGTATATACAAAAGAATAAAGTGCAAGGTGTAGATACAGATGATACGCACACACA AAGCTTACTTTTTAGTGCTATAAGTAAAAATCATCGTAAAATGGTGTCTTTAACGCATTTGCGCGAGGAGATTGTTAAAT ATACTTTAGGATTAGAAAATGGAATTTGA
Upstream 100 bases:
>100_bases GCCAAAAACCCGGAATGATGACTTTTATTATGGAAGATAAGAAAAATGAGAAATAACATAAATCAAATGTATATCTTTAG AAAAGGGCAATGAGGCAAAT
Downstream 100 bases:
>100_bases AATTATTAAACCCACTCTCGCAGATATTCCTCAAATGCGAGAGATTGTAAGTGTGGAAGTTAAAAATGGCGTGATTTTAG AGCGAAGCGAAGATGAGATG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVQVIESRFMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLNKPLAKSSSTPGKTQLINFFASVWVWHNQRLPLTF IDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLVDARHTDLAIDTSVATMLEQICRGDQCILRIYTKADKLNQS ALNALYKRVYIQKNKVQGVDTDDTHTQSLLFSAISKNHRKMVSLTHLREEIVKYTLGLENGI
Sequences:
>Translated_222_residues MVQVIESRFMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLNKPLAKSSSTPGKTQLINFFASVWVWHNQRLPLTF IDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLVDARHTDLAIDTSVATMLEQICRGDQCILRIYTKADKLNQS ALNALYKRVYIQKNKVQGVDTDDTHTQSLLFSAISKNHRKMVSLTHLREEIVKYTLGLENGI >Mature_222_residues MVQVIESRFMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLNKPLAKSSSTPGKTQLINFFASVWVWHNQRLPLTF IDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLVDARHTDLAIDTSVATMLEQICRGDQCILRIYTKADKLNQS ALNALYKRVYIQKNKVQGVDTDDTHTQSLLFSAISKNHRKMVSLTHLREEIVKYTLGLENGI
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Escherichia coli, GI145693205, Length=160, Percent_Identity=40.625, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_HELHP (Q7VGJ2)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860860.1 - HSSP: O57939 - ProteinModelPortal: Q7VGJ2 - SMR: Q7VGJ2 - GeneID: 1493017 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1329 - NMPDR: fig|235279.1.peg.1329 - HOGENOM: HBG447097 - OMA: LIDARHF - ProtClustDB: PRK00454 - BioCyc: HHEP235279:HH_1329-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 25212; Mature: 25212
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVIESRFMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLNKPLAKSSSTPGKTQ CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHH LINFFASVWVWHNQRLPLTFIDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLV HHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARHTDLAIDTSVATMLEQICRGDQCILRIYTKADKLNQSALNALYKRVYIQKNKVQGVD HCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC TDDTHTQSLLFSAISKNHRKMVSLTHLREEIVKYTLGLENGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVQVIESRFMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLNKPLAKSSSTPGKTQ CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHH LINFFASVWVWHNQRLPLTFIDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLV HHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARHTDLAIDTSVATMLEQICRGDQCILRIYTKADKLNQSALNALYKRVYIQKNKVQGVD HCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC TDDTHTQSLLFSAISKNHRKMVSLTHLREEIVKYTLGLENGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954