| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266766
Identifier: 32266766
GI number: 32266766
Start: 1226460
End: 1227650
Strand: Direct
Name: 32266766
Synonym: HH1267
Alternate gene names: NA
Gene position: 1226460-1227650 (Clockwise)
Preceding gene: 32266765
Following gene: 32266770
Centisome position: 68.17
GC content: 35.35
Gene sequence:
>1191_bases ATGCAAGAAATACCTAAAAATCGTTTTGAAGAAAAAATCTATATTTTAACTCATCGTCCACGCTTTATGTTTGCACTCTT TTCTAGCACCTCTATGACCGTGTTTGGAAGTATGATTATTGCCACTTCGATACCTGCTATTGAGAAGCATTTTGCAGATA TTCCACATATACAAACGCTTTCAAAGCTTATTTTGACACTTCCTGCACTTTTTATTATGTTATTTTCACCATTAGGTGGA ATTCTTATTGATAAGTTTGGACGTTTAAAGTTCCTTATTAGTTCTATGATTCTATGGAGTATAAGTGGTATGCTTGGGGC TGTATGGGAAAATATCTATTGGATTCTTTTTTCTCGTGCACTTTTTGGTATTGCAACAGCATTTGTTATGACAACTGCAA GCACATTAGTGGCAGATTATTATGTGGGGGAAGAGCGTTCAAAGGCTTTGGGTATACAAGGTTTTGCAACAGCGTGTAGC AGTGCAATTTTTATGTGTATTGGCGGTATTTTGGCACATTTTGATTGGCATTATCCTTTTTTCGTATATGGGCTTGGTAT CTTTTTGAGTATATTCGTTGCGAGCACACTTTTTGAACCTCGCACAAGTAAGATTAAGAGAATCTTAGAAGAAACGCATA AAGATTTCCATATCACATCAATTTTGCCCTGTTATTTTTTTGGTTTTATTATTATGGTTGCCTATTATACTTCACCTACG CAGATTCCACATTTTATTGTAGAAAATTTAGGTAAAAGTGAAATCATAGTTGGCTTTTGTATCTCAGCTTCAGCTTTTGC GTATGGTGTATCATCTCTTTTTTATCCAAGAATTCGGCAATTTTTATCCGTAAAAGATATTTATGTTGTTGGATTTTTGT TTATGGGGAGCGGATTTGCCCTTATTTTCATATTGCACAATATTTATGCGGTTGTATTGGGATTACTTCTTGTGGGCACT GGTGGAGGCGCAATGATTGTGAATAATTCATCTTTATTGCTTAGTAAAGTGCCTAAAGGACACATAGCAAAAGCAATTGG AATCTTAAGTGCTACCGCGTGTTTTGGGCAGTTTGTCTCGCCATTATTTTCCCAGCCTATTGTGCATAGATATGGAATCG TTCATCTTTTTTTGGTTGTAGCATTACTCCTTTTTATTATGGCTGTATTTGCTTTATGCAAACCAAAATAA
Upstream 100 bases:
>100_bases TGTGCTTCTTGTGCCTTAATAATTTTCTTTATTTGGCTAAAATATGTTTATTCAAAAAGTTATAGATATTAGTAAATAAA ATGTTATTTGTGGAGAGATT
Downstream 100 bases:
>100_bases AACTTGATTGTTTATAGAGATTCACTGACTTCATCAACAAGATAAAGTAAATTCTGCCATATAATATTTGTTTTATCATT TAAACCAATTTCACAAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; MFS Permease; Facilitator Family Transporter; Facilitator Family Protein; Facilitator Superfamily Permease; Transporter Facilitator Family; Efflux Protein; Facilitator Family Multidrug Efflux Transporter; Multidrug ABC Transporter; MFS Transport System Component; Transporter-Like Membrane Protein; Transporter/Antibiotic Resistance Protein; Multidrug Resistance Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter; Facilitator Superfamily Efflux Protein; Multidrug Transporter; Permease MFS Family; Multidrug-Efflux Transporter
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MQEIPKNRFEEKIYILTHRPRFMFALFSSTSMTVFGSMIIATSIPAIEKHFADIPHIQTLSKLILTLPALFIMLFSPLGG ILIDKFGRLKFLISSMILWSISGMLGAVWENIYWILFSRALFGIATAFVMTTASTLVADYYVGEERSKALGIQGFATACS SAIFMCIGGILAHFDWHYPFFVYGLGIFLSIFVASTLFEPRTSKIKRILEETHKDFHITSILPCYFFGFIIMVAYYTSPT QIPHFIVENLGKSEIIVGFCISASAFAYGVSSLFYPRIRQFLSVKDIYVVGFLFMGSGFALIFILHNIYAVVLGLLLVGT GGGAMIVNNSSLLLSKVPKGHIAKAIGILSATACFGQFVSPLFSQPIVHRYGIVHLFLVVALLLFIMAVFALCKPK
Sequences:
>Translated_396_residues MQEIPKNRFEEKIYILTHRPRFMFALFSSTSMTVFGSMIIATSIPAIEKHFADIPHIQTLSKLILTLPALFIMLFSPLGG ILIDKFGRLKFLISSMILWSISGMLGAVWENIYWILFSRALFGIATAFVMTTASTLVADYYVGEERSKALGIQGFATACS SAIFMCIGGILAHFDWHYPFFVYGLGIFLSIFVASTLFEPRTSKIKRILEETHKDFHITSILPCYFFGFIIMVAYYTSPT QIPHFIVENLGKSEIIVGFCISASAFAYGVSSLFYPRIRQFLSVKDIYVVGFLFMGSGFALIFILHNIYAVVLGLLLVGT GGGAMIVNNSSLLLSKVPKGHIAKAIGILSATACFGQFVSPLFSQPIVHRYGIVHLFLVVALLLFIMAVFALCKPK >Mature_396_residues MQEIPKNRFEEKIYILTHRPRFMFALFSSTSMTVFGSMIIATSIPAIEKHFADIPHIQTLSKLILTLPALFIMLFSPLGG ILIDKFGRLKFLISSMILWSISGMLGAVWENIYWILFSRALFGIATAFVMTTASTLVADYYVGEERSKALGIQGFATACS SAIFMCIGGILAHFDWHYPFFVYGLGIFLSIFVASTLFEPRTSKIKRILEETHKDFHITSILPCYFFGFIIMVAYYTSPT QIPHFIVENLGKSEIIVGFCISASAFAYGVSSLFYPRIRQFLSVKDIYVVGFLFMGSGFALIFILHNIYAVVLGLLLVGT GGGAMIVNNSSLLLSKVPKGHIAKAIGILSATACFGQFVSPLFSQPIVHRYGIVHLFLVVALLLFIMAVFALCKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43976; Mature: 43976
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIPKNRFEEKIYILTHRPRFMFALFSSTSMTVFGSMIIATSIPAIEKHFADIPHIQTL CCCCCCCHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH SKLILTLPALFIMLFSPLGGILIDKFGRLKFLISSMILWSISGMLGAVWENIYWILFSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGIATAFVMTTASTLVADYYVGEERSKALGIQGFATACSSAIFMCIGGILAHFDWHYPF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH FVYGLGIFLSIFVASTLFEPRTSKIKRILEETHKDFHITSILPCYFFGFIIMVAYYTSPT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCC QIPHFIVENLGKSEIIVGFCISASAFAYGVSSLFYPRIRQFLSVKDIYVVGFLFMGSGFA CHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LIFILHNIYAVVLGLLLVGTGGGAMIVNNSSLLLSKVPKGHIAKAIGILSATACFGQFVS HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH PLFSQPIVHRYGIVHLFLVVALLLFIMAVFALCKPK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQEIPKNRFEEKIYILTHRPRFMFALFSSTSMTVFGSMIIATSIPAIEKHFADIPHIQTL CCCCCCCHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH SKLILTLPALFIMLFSPLGGILIDKFGRLKFLISSMILWSISGMLGAVWENIYWILFSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGIATAFVMTTASTLVADYYVGEERSKALGIQGFATACSSAIFMCIGGILAHFDWHYPF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH FVYGLGIFLSIFVASTLFEPRTSKIKRILEETHKDFHITSILPCYFFGFIIMVAYYTSPT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCC QIPHFIVENLGKSEIIVGFCISASAFAYGVSSLFYPRIRQFLSVKDIYVVGFLFMGSGFA CHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LIFILHNIYAVVLGLLLVGTGGGAMIVNNSSLLLSKVPKGHIAKAIGILSATACFGQFVS HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH PLFSQPIVHRYGIVHLFLVVALLLFIMAVFALCKPK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA