| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is fixP
Identifier: 32266758
GI number: 32266758
Start: 1222370
End: 1223242
Strand: Direct
Name: fixP
Synonym: HH1259
Alternate gene names: NA
Gene position: 1222370-1223242 (Clockwise)
Preceding gene: 32266757
Following gene: 32266759
Centisome position: 67.94
GC content: 37.57
Gene sequence:
>873_bases ATGAATTGGTCAGATAATATAACAACACTAGGTTTGTTAGGTGCTTTTGTTATCTTAATACTTACTATTTTTATAATAGG GGTATATCTTAAAAAGATTAAAGATGGCAAAGCTGAAGGAGAATTGACAAGTGAGAGCTGGGATGGTATTGGTGAGCAGA CGAATAATCTTCCTGTTGGTTGGGCTGCCTGCTTTTTAGGTGTGCTTATTTGGGGTTTTTGGTATATCTTTTTAGGATAT CCACTTAATGCTTATTCGCAGATTGGAGAATATAACCAAGAAGTCCAAAGTTATAATCAAAAATATGCTTCTACTTGGGA AAATTTAAGTGGAGAGGAACTTGGTAGTATGGGACAAAGTATTTTTTTAGTGCAATGTTCTCAATGCCACGGCATCACAG CAGAAGGTATGAATGGTAAGGCAGAAAACCTTACAAAATGGGGTAAAGAAGAGGGCATTATTAAAGTTATTAAAGAAGGA AGTAAAGGCTTAGATTATATGGCTGGCGAAATGGTGCCTGTAGCAGTAAGCGATAGCGAAGCAAAAGCAATAGCAGCTTA TGTTATGCAAGATATTTCAAATACGAAAAGCACCAAATATCCGCTTGAGGTAAGTAAAGGCAAAGAGCTTTTTGCAATAC ATTGTGCAGCTTGTCACGGAGATGAAGGCAAGGGTAATGGAGGTGGTGTAGATGGATTTGCACCTGATCTTAGCCAATAT GGCACATCGCACTTTTTAGCAGAAGTGCTTGCAAAAGGCAAAAAAGGTATAATTGGTGTTATGCCTTCGTTTGAATATGC TAATTTTGCGCCAAGCCAAAAAGAGGCGCTTAATGTATATATTCGCTCTTTAGAATCATCTGAAGCTGAATAA
Upstream 100 bases:
>100_bases AAGGTGTAAAGGATTATGAAAAATATGCTAATCTTGCTCTTAATGATAATCTTGATGATGAGCCCATTGAACCACGAATA AAAAATGAAAGGGGAACTAG
Downstream 100 bases:
>100_bases AGGAGATTGTAATGAATGGTTTATTTGGACTTAATGGTTTAACAGGGTTTATTATCGCTGTAGTGCTTTTGCTTAGCATT GTTGCAGGTTTGGGCACTTG
Product: cb-type cytochrome C oxidase subunit III
Products: ferricytochrome c; H2O
Alternate protein names: Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit CcoP; FixP2 Diheme C-Type Cytochrome; CB-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome-C Oxidase Subunit III; Cytochrome C Oxidase Diheme Subunit; Cytochrome-C Oxidase FixP Chain; Cbb3 Oxidase Subunit III
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE
Sequences:
>Translated_290_residues MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE >Mature_290_residues MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 31452; Mature: 31452
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH WAACFLGVLIWGFWYIFLGYPLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE IFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEGSKGLDYMAGEMVPVAVSDSE EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCH AKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY HHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH WAACFLGVLIWGFWYIFLGYPLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE IFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEGSKGLDYMAGEMVPVAVSDSE EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCH AKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY HHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA