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The map label for this gene is tapC [H]

Identifier: 32266616

GI number: 32266616

Start: 1088211

End: 1089455

Strand: Direct

Name: tapC [H]

Synonym: HH1117

Alternate gene names: 32266616

Gene position: 1088211-1089455 (Clockwise)

Preceding gene: 32266615

Following gene: 32266618

Centisome position: 60.48

GC content: 34.62

Gene sequence:

>1245_bases
GTGCAAAATATGAAAAAACTGCCACAAAAATACCTTATTAAAGGCATTAAAGATAACCAACACATTCAAATAACACTCTT
TGCAACCTCGTATGAGAATGCTAAGGAGCTAAGTTTGCATAAGCATAATATTTATCCTATTGAAATTAAAGCCTTAAGTG
GCTTTGAATTTTTACACCTACAAATGCTACAACTTGATAGCAAAATCACAAAACAGGATATAAGTGCACTTTTTTTGCAA
ATTTCCATTATGCTTTGTGCCTCATTGCCAATCCTTGAGGTCATTCAAGTATGTGCTAAAAATACCAAAAAAATAGCCCT
AAAACGAATTTTACTTGAAATTGCTTATCGTTTGAATCTTGGACAAAAGCTTTCTGTCGCATTTAAAGAACATAAACATA
TTTTTGGCGATATGACTTGGAGTATGCTAGCACTTGGAGAAAAGAGCGGGGAGCTTGGTGAAATTTTTAAAATGCTAAGT
GCGCATCTTGCAAGGGAACACAAAAACAAAAGTAAAGTTAAGCGCGCACTTTTTTATCCTTTGCTTGTGCTTATAAGCAT
TATTGGTGCATTTGTGGGTATTGTAATGTTTGTGCTACCTGAATTTTTGGTAATGTTTGAAGAATTAAGTGTGAATCTAC
CTATTTATACGCGGATTCTCATTTATATGCAATCTTTTTTTGAGCATTTTGGACTTATTTTTATTCTTGGGCTTCTCTTT
ATGACTTTTGGGTTGCAAAAATTATATAAACACTCTTTAGACTTTAAGCATAAAATCCATACTTTAATCTTGCACTTACC
CTTTGTAGGCGAAATTATAAAGCTTAATTTTTTCTACCAATACACTTTCACGCTCTTTTTACAGCTCAAATCTGCCACAC
CTCTTGACTTAGCTCTTTCCCTTAGCAATAATGCACTAAGTAATCTCGCACTCAAAGCACAATTTAACAAAGTGCTTGAA
TATGTCAAAAATGGCAAAAGCCTCTCTTTAGCGCTTATACAAGAAGAAATGCTTGATGAAATTTCTTTGGCTCTTCTTGC
TGCTGGAGAACAAAGTGGCAAACTTCCTGAAATGCTTGAAGTATGCGCTAAACGATTTGAGGAAATTGCCCAAGAAAAAA
TAGATTTTCTCATTTCACTTATTGAGCCAATTTTGAGCCTTTGTATGGGTATGCTACTTTTATTTCTAGCTTTGGGCGTA
TTTGTGCCTATGTGGGATATGAGTGCGCACGCTATGAGTGCTTAA

Upstream 100 bases:

>100_bases
TTCTACAATCTCTCCGAGAAAAAGGGTTTGAAAGTATGTTCGAAAATGGATTTAAGATTGCAAGCGAAGGTTTAAGTTCT
TTTGAAGAAGTATATAGGGT

Downstream 100 bases:

>100_bases
TAAGGGACTTAATGTGAGGCAAAATCGTGCTAAAATCTGCACCATTTGGCGCAAACAAATCATCTCTTTTGGACTTAGGA
CTTAAAGAACAAAGTATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MQNMKKLPQKYLIKGIKDNQHIQITLFATSYENAKELSLHKHNIYPIEIKALSGFEFLHLQMLQLDSKITKQDISALFLQ
ISIMLCASLPILEVIQVCAKNTKKIALKRILLEIAYRLNLGQKLSVAFKEHKHIFGDMTWSMLALGEKSGELGEIFKMLS
AHLAREHKNKSKVKRALFYPLLVLISIIGAFVGIVMFVLPEFLVMFEELSVNLPIYTRILIYMQSFFEHFGLIFILGLLF
MTFGLQKLYKHSLDFKHKIHTLILHLPFVGEIIKLNFFYQYTFTLFLQLKSATPLDLALSLSNNALSNLALKAQFNKVLE
YVKNGKSLSLALIQEEMLDEISLALLAAGEQSGKLPEMLEVCAKRFEEIAQEKIDFLISLIEPILSLCMGMLLLFLALGV
FVPMWDMSAHAMSA

Sequences:

>Translated_414_residues
MQNMKKLPQKYLIKGIKDNQHIQITLFATSYENAKELSLHKHNIYPIEIKALSGFEFLHLQMLQLDSKITKQDISALFLQ
ISIMLCASLPILEVIQVCAKNTKKIALKRILLEIAYRLNLGQKLSVAFKEHKHIFGDMTWSMLALGEKSGELGEIFKMLS
AHLAREHKNKSKVKRALFYPLLVLISIIGAFVGIVMFVLPEFLVMFEELSVNLPIYTRILIYMQSFFEHFGLIFILGLLF
MTFGLQKLYKHSLDFKHKIHTLILHLPFVGEIIKLNFFYQYTFTLFLQLKSATPLDLALSLSNNALSNLALKAQFNKVLE
YVKNGKSLSLALIQEEMLDEISLALLAAGEQSGKLPEMLEVCAKRFEEIAQEKIDFLISLIEPILSLCMGMLLLFLALGV
FVPMWDMSAHAMSA
>Mature_414_residues
MQNMKKLPQKYLIKGIKDNQHIQITLFATSYENAKELSLHKHNIYPIEIKALSGFEFLHLQMLQLDSKITKQDISALFLQ
ISIMLCASLPILEVIQVCAKNTKKIALKRILLEIAYRLNLGQKLSVAFKEHKHIFGDMTWSMLALGEKSGELGEIFKMLS
AHLAREHKNKSKVKRALFYPLLVLISIIGAFVGIVMFVLPEFLVMFEELSVNLPIYTRILIYMQSFFEHFGLIFILGLLF
MTFGLQKLYKHSLDFKHKIHTLILHLPFVGEIIKLNFFYQYTFTLFLQLKSATPLDLALSLSNNALSNLALKAQFNKVLE
YVKNGKSLSLALIQEEMLDEISLALLAAGEQSGKLPEMLEVCAKRFEEIAQEKIDFLISLIEPILSLCMGMLLLFLALGV
FVPMWDMSAHAMSA

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=395, Percent_Identity=23.7974683544304, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1786295, Length=364, Percent_Identity=22.8021978021978, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 47205; Mature: 47205

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNMKKLPQKYLIKGIKDNQHIQITLFATSYENAKELSLHKHNIYPIEIKALSGFEFLHL
CCCHHHCCHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEECCHHHHHH
QMLQLDSKITKQDISALFLQISIMLCASLPILEVIQVCAKNTKKIALKRILLEIAYRLNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GQKLSVAFKEHKHIFGDMTWSMLALGEKSGELGEIFKMLSAHLAREHKNKSKVKRALFYP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LLVLISIIGAFVGIVMFVLPEFLVMFEELSVNLPIYTRILIYMQSFFEHFGLIFILGLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MTFGLQKLYKHSLDFKHKIHTLILHLPFVGEIIKLNFFYQYTFTLFLQLKSATPLDLALS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LSNNALSNLALKAQFNKVLEYVKNGKSLSLALIQEEMLDEISLALLAAGEQSGKLPEMLE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VCAKRFEEIAQEKIDFLISLIEPILSLCMGMLLLFLALGVFVPMWDMSAHAMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MQNMKKLPQKYLIKGIKDNQHIQITLFATSYENAKELSLHKHNIYPIEIKALSGFEFLHL
CCCHHHCCHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEECCHHHHHH
QMLQLDSKITKQDISALFLQISIMLCASLPILEVIQVCAKNTKKIALKRILLEIAYRLNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GQKLSVAFKEHKHIFGDMTWSMLALGEKSGELGEIFKMLSAHLAREHKNKSKVKRALFYP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LLVLISIIGAFVGIVMFVLPEFLVMFEELSVNLPIYTRILIYMQSFFEHFGLIFILGLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MTFGLQKLYKHSLDFKHKIHTLILHLPFVGEIIKLNFFYQYTFTLFLQLKSATPLDLALS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LSNNALSNLALKAQFNKVLEYVKNGKSLSLALIQEEMLDEISLALLAAGEQSGKLPEMLE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VCAKRFEEIAQEKIDFLISLIEPILSLCMGMLLLFLALGVFVPMWDMSAHAMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]