| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is flgG
Identifier: 32266580
GI number: 32266580
Start: 1050682
End: 1051470
Strand: Direct
Name: flgG
Synonym: HH1081
Alternate gene names: 32266580
Gene position: 1050682-1051470 (Clockwise)
Preceding gene: 32266579
Following gene: 32266588
Centisome position: 58.4
GC content: 41.19
Gene sequence:
>789_bases ATGATGAGATCACTCTACACTGCTAGCACGGGTATGCTCGGACAGCAACTTCAAATTGATAATACCTCCAATAATATTGC CAATGTCAATACCACAGGCTATAAAAAGCAAAGGGCAGAATTCGCTGATTTGTTTTATCAAGTGTTGCAATACGCGGGAA CAAGCACAAGTGAGACGACCATTTCTCCTACAGGCATTGAAGTAGGCATCGGTGTGCGTCCTGTGGCAATACAAAAAATG TTTTCTCAAGGACACCCAAAAGAGACTGAAAATAACCTTGATATTGCTATTACAGGGAATGGATTTTTTCAAATTGAACT TCCCGATGGTAATATAGCCTATACACGCGCAGGAAGCTTCAAGCTTGATAATGATGGCAATGTCGTCAATGCGGAGGGTT ATCGCCTTATCCCAGAGCTTACAATTCCAGAGGGTGCTACACAAATTAATATCGGCACCGATGGCACGGTGAGCGTAATT GAAGGAAATCAAACCGAAGTTAATATATTAGGACAAATTGAAATTGTTAATTTTATCAATCCCGCAGGTTTGCATTCTTT GGGCGATAATCTCTTTATCAATACCAATGCTTCAGGAGACCCTGTGGCAGGTGTGCCCGGACTTGACGGATTTGGGCAAC TCCGACAAGGTTTCTTGGAATTAAGCAATGTTAAACTTGTTGAAGAGATGACAGATTTGATTACAGGACAAAGAGCCTAT GAAGCAAACTCTAAGACTATCCAAACAGCAGATTCTATGTTGCAAACGGTGAATGGATTAAAACGATAA
Upstream 100 bases:
>100_bases CCTATAAAAGTGCTAAAAATATATTTATGGAATCTCTTTTGCTTAAAAGATTGTGTGAAAATCGCTCTTAAAGATTCTAT TTTGATTAAAGGATTGTCCT
Downstream 100 bases:
>100_bases AATAGGTCTGTTTTATTGCAGTTTATTTAGCTCATAATAGAGCTTATCAGCCACAAGCTTATAGCCATTAGGTAGCAAAT GCACATCAGCTTTTGCTAAA
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETTISPTGIEVGIGVRPVAIQKM FSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSFKLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVI EGNQTEVNILGQIEIVNFINPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRAY EANSKTIQTADSMLQTVNGLKR
Sequences:
>Translated_262_residues MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETTISPTGIEVGIGVRPVAIQKM FSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSFKLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVI EGNQTEVNILGQIEIVNFINPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRAY EANSKTIQTADSMLQTVNGLKR >Mature_262_residues MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETTISPTGIEVGIGVRPVAIQKM FSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSFKLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVI EGNQTEVNILGQIEIVNFINPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRAY EANSKTIQTADSMLQTVNGLKR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=47.6923076923077, Blast_Score=253, Evalue=7e-69, Organism=Escherichia coli, GI1787316, Length=111, Percent_Identity=42.3423423423423, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787317, Length=258, Percent_Identity=29.0697674418605, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28166; Mature: 28166
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT CCCCEECCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE ISPTGIEVGIGVRPVAIQKMFSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSF ECCCCEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCE KLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVNILGQIEIVNFIN EECCCCCEECCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCEEEEEEEEEEEEECCC PAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRAY CCCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHC EANSKTIQTADSMLQTVNGLKR CCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT CCCCEECCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE ISPTGIEVGIGVRPVAIQKMFSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSF ECCCCEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCE KLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVNILGQIEIVNFIN EECCCCCEECCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCEEEEEEEEEEEEECCC PAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRAY CCCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHC EANSKTIQTADSMLQTVNGLKR CCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]