| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is nadE
Identifier: 32266507
GI number: 32266507
Start: 984364
End: 985188
Strand: Direct
Name: nadE
Synonym: HH1008
Alternate gene names: 32266507
Gene position: 984364-985188 (Clockwise)
Preceding gene: 32266501
Following gene: 32266508
Centisome position: 54.71
GC content: 35.76
Gene sequence:
>825_bases ATGAAACATTTTGTGAATCCTTGCATACATTTTATTCAAAAGCAACTTCAAGAACGAGGTTTTAAGAAAGTAGTATTAGG CTTAAGTGGTGGTATAGATTCTGCAGTAGTGGCTACTTTGGCTACTTTAGCCTTAGGGAGCGAAAATGTGCGAGCTCTTC TTATGCCCTCTCTTAGTTCTAATGAGGAACACTTTAATGATGCTTTCAATCTTGCTCATAATCTTGAACTTGAAAGCAAA ATTATCCAGCTTGCCCCATTTCAAGAGAATTTTGCAAAGCAAGAAGGTATGGATTTGAGCGGAAAATATATGGAAAAGCT TGATATGAATCAAAAAATGCGTATGGGCAATTTTTGCGCAAGAATCCGTATGACTATGCTTTATGATTGCGCAAGTGCAG ACAATGCCCTTGTATTAGGAACAAGCAATAAAAGTGAGATTCTATTAGGTTATGGCACAATATTTGGAGATTTAGCATAC GCTATAAATCCTATTGGTGGGCTATATAAAACACAAATTTTTGCTTTCGCGCGAGCACTTAATGTGCCACAAGAGATTAT TGCCAAAAAACCAAGTGCAGATTTATTCGCTAATCAAAGTGATGAAACCGATTTGGGATATAATTATGCGGACATTGATA CATTCTTAGAAGCATTTGAGAAACTAGGAGGTGTTGAAGCTACACAAAATAAAGAACGAGAGCATATCAAAGAAAAACTT AAAAATGCAGGATTTGAATGCAATATGATAGAATCTCTAAGCACTCGTGTATGGAATAACACCTTTAAGCGCACTAAGCC AACCATATTAGAATATAAAGTTTAA
Upstream 100 bases:
>100_bases AAAAAGGCTTAAATGTTGTTTATTCTTGTTAAAATTTTTGTTTATTTTTAGAGTATATTATAATTACGATACGAGATGAT AAAAATTTTAAGGTATAGAA
Downstream 100 bases:
>100_bases GGAGAATGTATGCGATGGATTGATGCATATTTTTATCAGCCAAATTTTACCCAAAAGCTTGTGAGTTTTGCGCTTTTGCC TTTATCATTGCTTTATGGAA
Product: NH(3)-dependent NAD(+) synthetase NadE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKHFVNPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSSNEEHFNDAFNLAHNLELESK IIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCARIRMTMLYDCASADNALVLGTSNKSEILLGYGTIFGDLAY AINPIGGLYKTQIFAFARALNVPQEIIAKKPSADLFANQSDETDLGYNYADIDTFLEAFEKLGGVEATQNKEREHIKEKL KNAGFECNMIESLSTRVWNNTFKRTKPTILEYKV
Sequences:
>Translated_274_residues MKHFVNPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSSNEEHFNDAFNLAHNLELESK IIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCARIRMTMLYDCASADNALVLGTSNKSEILLGYGTIFGDLAY AINPIGGLYKTQIFAFARALNVPQEIIAKKPSADLFANQSDETDLGYNYADIDTFLEAFEKLGGVEATQNKEREHIKEKL KNAGFECNMIESLSTRVWNNTFKRTKPTILEYKV >Mature_274_residues MKHFVNPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSSNEEHFNDAFNLAHNLELESK IIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCARIRMTMLYDCASADNALVLGTSNKSEILLGYGTIFGDLAY AINPIGGLYKTQIFAFARALNVPQEIIAKKPSADLFANQSDETDLGYNYADIDTFLEAFEKLGGVEATQNKEREHIKEKL KNAGFECNMIESLSTRVWNNTFKRTKPTILEYKV
Specific function: This NAD Synthase Uses Nh(3) In Preference To Glutamine. [C]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD synthetase family
Homologues:
Organism=Escherichia coli, GI1788036, Length=229, Percent_Identity=29.2576419213974, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NADE_HELHP (Q7VHF9)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860539.1 - ProteinModelPortal: Q7VHF9 - SMR: Q7VHF9 - GeneID: 1492697 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1008 - NMPDR: fig|235279.1.peg.1008 - HOGENOM: HBG351567 - OMA: RDFVLGN - BioCyc: HHEP235279:HH_1008-MONOMER - BRENDA: 6.3.1.5 - HAMAP: MF_00193 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR022926 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00552
Pfam domain/function: PF02540 NAD_synthase
EC number: =6.3.1.5
Molecular weight: Translated: 30670; Mature: 30670
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: ACT_SITE 29-29
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFVNPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSS CCCHHHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC NEEHFNDAFNLAHNLELESKIIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCA CHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH RIRMTMLYDCASADNALVLGTSNKSEILLGYGTIFGDLAYAINPIGGLYKTQIFAFARAL HHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH NVPQEIIAKKPSADLFANQSDETDLGYNYADIDTFLEAFEKLGGVEATQNKEREHIKEKL CCCHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KNAGFECNMIESLSTRVWNNTFKRTKPTILEYKV HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure MKHFVNPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSS CCCHHHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC NEEHFNDAFNLAHNLELESKIIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCA CHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH RIRMTMLYDCASADNALVLGTSNKSEILLGYGTIFGDLAYAINPIGGLYKTQIFAFARAL HHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH NVPQEIIAKKPSADLFANQSDETDLGYNYADIDTFLEAFEKLGGVEATQNKEREHIKEKL CCCHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KNAGFECNMIESLSTRVWNNTFKRTKPTILEYKV HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954