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The map label for this gene is 32266429

Identifier: 32266429

GI number: 32266429

Start: 902671

End: 903975

Strand: Direct

Name: 32266429

Synonym: HH0930

Alternate gene names: NA

Gene position: 902671-903975 (Clockwise)

Preceding gene: 32266428

Following gene: 32266432

Centisome position: 50.17

GC content: 32.8

Gene sequence:

>1305_bases
ATGAAATATCTTTTTGCTGTTTTATTTACATTATGCTTTGGTCTTGCAACACTAAGCTATGGAGCATTTGATGAAGATAG
TTATCTTTTTGAAGCTATTGAACTTGAAACCCAAAACGAATTTGCCAAAGCGCGTGATATGTATCTTGTGCTTTATGAAG
AAACACGCAAACTTGAATACTTTAAAGAAGCCATTTTGCTTTCCTCAATGCTTGATAATCCCTCTGCTACGCTTGATTTT
GCCAATGAATACGTTGCACAAGGTGGTGCAAAAGATTTAGTAATTCATAAAGTATTTTTAGATTGCTATCTCAAATTAGG
ATTAAGCGAGCACGCCCTTGAAGAAGTCAAAATCATCGCCAAAAGCGAAGATTCTCCTATTTTAGATGATATTTTAGGCT
CACTCTACGCTTCAAAAGGTGATTTTAAAAAATCTCTTATAGCTCTTAATCGCGCGTATGAGCGCACTAAATCACAAGAT
GTTTTGCAAAAAATAGTTGCTGTGCATCTTACACAAGGACACAATAATGAAGCACTTAAAGCATTAGATTCTCATATTGA
ACAATATGGCTGTGCAGGTAATTTTTGTAAATTTAGTATTGAAATTTATGGGCGTTTTTCTCAAAGCGCAAAAATTGAGC
AAATTTTCAAAACCGCTTTTGAAAAAAATCCTACTATTGAAAACGCACAAAACCTTATCCTTATTTATGCGCACTCAAAA
AAATTTAAGCAAGCCTCACAAATTGCTAAGCAATTCCCCTTTAAACCACAGATTCTCTTAGAGCTCTATATCGCACAAAA
AGATTATCTTAATGCCTCTAAACAAGCAAAAATTCTCTATCAAGAGAATCATAATCCCTATTTTCTTGCATTAGAACAAA
TTTATATGTTTGAATCTTTAACAAACAAGCAAGATGTAAAACAAATAAAAAATATAGCAGAGAATCTCCAAAAAGCTCTC
ACATTAATGCAAACTCCCAATAAAGATACGCCCAAAAATAATCGTGTTGATGCTTCATTGCAAAATTCACAAAATAGCGA
TATAGGCTTTTTTTTAAATTTTTTGGGATATTTAATGATTGATTATGAAATTGATGTAAAAAAAGGTGTGGGGCATATCA
AAAAAGCACTTGAGATTTCCCCTCGTAACCCTGCATATTTGGATTCTCTAGCGTGGGGATATTATAAACTTAAAGATTGC
AACAATGCAATTGAAACTTTTAAACTTATCCCCCAAGATGAAATAAAAAAAGAACAAGAGCTTCAAGAGCATAAAAAACT
TATTGAAAGCTGCAACATACGCTAA

Upstream 100 bases:

>100_bases
CGTGATTTTCCTTTTTGGGAAGCACATAAATCTCTTGATGAAAATGCTCTTGCTATGCTTATGCACGAATGTCAAGGCAT
ACGCACAAAAAAGGAATAAA

Downstream 100 bases:

>100_bases
ATCACACTATTTTTATGGAGCAATTCGCCCTCATAAAGAAATATAGAGGGAGTATAATCTATATTTTTTATCGCATCTTT
TTTCGCAAAAGAAAGCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; ATP Dependent Nuclease AddB; ATP-Dependent Nuclease; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Lipoprotein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKYLFAVLFTLCFGLATLSYGAFDEDSYLFEAIELETQNEFAKARDMYLVLYEETRKLEYFKEAILLSSMLDNPSATLDF
ANEYVAQGGAKDLVIHKVFLDCYLKLGLSEHALEEVKIIAKSEDSPILDDILGSLYASKGDFKKSLIALNRAYERTKSQD
VLQKIVAVHLTQGHNNEALKALDSHIEQYGCAGNFCKFSIEIYGRFSQSAKIEQIFKTAFEKNPTIENAQNLILIYAHSK
KFKQASQIAKQFPFKPQILLELYIAQKDYLNASKQAKILYQENHNPYFLALEQIYMFESLTNKQDVKQIKNIAENLQKAL
TLMQTPNKDTPKNNRVDASLQNSQNSDIGFFLNFLGYLMIDYEIDVKKGVGHIKKALEISPRNPAYLDSLAWGYYKLKDC
NNAIETFKLIPQDEIKKEQELQEHKKLIESCNIR

Sequences:

>Translated_434_residues
MKYLFAVLFTLCFGLATLSYGAFDEDSYLFEAIELETQNEFAKARDMYLVLYEETRKLEYFKEAILLSSMLDNPSATLDF
ANEYVAQGGAKDLVIHKVFLDCYLKLGLSEHALEEVKIIAKSEDSPILDDILGSLYASKGDFKKSLIALNRAYERTKSQD
VLQKIVAVHLTQGHNNEALKALDSHIEQYGCAGNFCKFSIEIYGRFSQSAKIEQIFKTAFEKNPTIENAQNLILIYAHSK
KFKQASQIAKQFPFKPQILLELYIAQKDYLNASKQAKILYQENHNPYFLALEQIYMFESLTNKQDVKQIKNIAENLQKAL
TLMQTPNKDTPKNNRVDASLQNSQNSDIGFFLNFLGYLMIDYEIDVKKGVGHIKKALEISPRNPAYLDSLAWGYYKLKDC
NNAIETFKLIPQDEIKKEQELQEHKKLIESCNIR
>Mature_434_residues
MKYLFAVLFTLCFGLATLSYGAFDEDSYLFEAIELETQNEFAKARDMYLVLYEETRKLEYFKEAILLSSMLDNPSATLDF
ANEYVAQGGAKDLVIHKVFLDCYLKLGLSEHALEEVKIIAKSEDSPILDDILGSLYASKGDFKKSLIALNRAYERTKSQD
VLQKIVAVHLTQGHNNEALKALDSHIEQYGCAGNFCKFSIEIYGRFSQSAKIEQIFKTAFEKNPTIENAQNLILIYAHSK
KFKQASQIAKQFPFKPQILLELYIAQKDYLNASKQAKILYQENHNPYFLALEQIYMFESLTNKQDVKQIKNIAENLQKAL
TLMQTPNKDTPKNNRVDASLQNSQNSDIGFFLNFLGYLMIDYEIDVKKGVGHIKKALEISPRNPAYLDSLAWGYYKLKDC
NNAIETFKLIPQDEIKKEQELQEHKKLIESCNIR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49779; Mature: 49779

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLFAVLFTLCFGLATLSYGAFDEDSYLFEAIELETQNEFAKARDMYLVLYEETRKLEY
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEEEHHHHHHHH
FKEAILLSSMLDNPSATLDFANEYVAQGGAKDLVIHKVFLDCYLKLGLSEHALEEVKIIA
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KSEDSPILDDILGSLYASKGDFKKSLIALNRAYERTKSQDVLQKIVAVHLTQGHNNEALK
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH
ALDSHIEQYGCAGNFCKFSIEIYGRFSQSAKIEQIFKTAFEKNPTIENAQNLILIYAHSK
HHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
KFKQASQIAKQFPFKPQILLELYIAQKDYLNASKQAKILYQENHNPYFLALEQIYMFESL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHH
TNKQDVKQIKNIAENLQKALTLMQTPNKDTPKNNRVDASLQNSQNSDIGFFLNFLGYLMI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHE
DYEIDVKKGVGHIKKALEISPRNPAYLDSLAWGYYKLKDCNNAIETFKLIPQDEIKKEQE
EEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEHHHHHHHHHHHCCCHHHHHHHHH
LQEHKKLIESCNIR
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKYLFAVLFTLCFGLATLSYGAFDEDSYLFEAIELETQNEFAKARDMYLVLYEETRKLEY
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEEEHHHHHHHH
FKEAILLSSMLDNPSATLDFANEYVAQGGAKDLVIHKVFLDCYLKLGLSEHALEEVKIIA
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KSEDSPILDDILGSLYASKGDFKKSLIALNRAYERTKSQDVLQKIVAVHLTQGHNNEALK
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH
ALDSHIEQYGCAGNFCKFSIEIYGRFSQSAKIEQIFKTAFEKNPTIENAQNLILIYAHSK
HHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
KFKQASQIAKQFPFKPQILLELYIAQKDYLNASKQAKILYQENHNPYFLALEQIYMFESL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHH
TNKQDVKQIKNIAENLQKALTLMQTPNKDTPKNNRVDASLQNSQNSDIGFFLNFLGYLMI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHE
DYEIDVKKGVGHIKKALEISPRNPAYLDSLAWGYYKLKDCNNAIETFKLIPQDEIKKEQE
EEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEHHHHHHHHHHHCCCHHHHHHHHH
LQEHKKLIESCNIR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA