Click here to switch to the map view.

The map label for this gene is 32266408

Identifier: 32266408

GI number: 32266408

Start: 882806

End: 883921

Strand: Direct

Name: 32266408

Synonym: HH0909

Alternate gene names: NA

Gene position: 882806-883921 (Clockwise)

Preceding gene: 32266407

Following gene: 32266409

Centisome position: 49.07

GC content: 39.7

Gene sequence:

>1116_bases
ATGCTACTTTTTACGCCCGGACCTACACCTGTGCCAGAATCCATACGCAATGCAATGAGTGAGCCTACTTTGCATCATCG
CACACCAGAGTTTGAAGCAATTTTTGCTCAAGCGAGAAAGGGGCTTTTAGAGATTTTGAAAATGCCTGAAGTGCTTATGC
TTGCAAGTAGTGGCACTGGTGCAATGGAAGCGTGTGTATGCACTTTTACTCAAAATAAAGTGCTAAGTATCAATAGTGGT
AAATTTGGTGAACGATTTGGCAAAATAGCAAAGGCACACAAAATCCCCTATACAGAAATCATTAATGATTGGGATACGCC
TGTAAGCGCGAAAAGTGTGCTTGAAGTGCTACAAAAAGAGAGTGAAATTGATTGCTTTTGTATCCAAATGTGCGAATCTG
CAGGAGGATTGCGCCACCCTGTAGAAGAAATTGCTCAAGCAATTAAAGCGCATAATCCGCGTATTGTAGTTGTTGTTGAT
GCCATTACTGCTATGGGTGTTGAAGAAATTGATACGACATATATTGATGCACTCATTGGCGGCTCACAAAAAGCTTTTAT
GCTCCCACCGGGCTTAAGCATTATAGGACTTTCTCATTATGCGATAGAACTTGCAAACGAGCGGAATATAGGTTTTTATT
TTAATCTCAAAACAGAGCTTAAAAATCAAGCACAAAATACGACTGCTTGGACTGCGCCTACGACAATTATCACAGGCTTG
ACACGATATTTTGAACTCATCAATGGCAATATGCAACAAGTTTATGCGCAAACCAAAGCGCGTTCTCTCGCTACACAAAA
AGCCCTAGAATCACTCGGGCTTAAAATCTACCCAAAATCTCCTGCAATAGCGATGAATACAATTTATGATGAGGTAAATG
CCGCACCTCTTAGGAAGATTCTTAAAAATGAATTTGCACTTAATGTAGCAGGTGGGCAAGATAAGCTTAAAACAAGTATT
ATACGCATTAATCAAATGGGACTTATCGCACTTAATGAGAGTGTGTGGGTTGTGAACGCAATAGAGCTTGCCCTAGAACG
ATTAAATCTTAGGAAATTTGATGGCACAGGAAATAAAGTATTTCTCACTACCTATTATGAGATATTAGATAAATAG

Upstream 100 bases:

>100_bases
CTGCACAGCCTCTCCGATTAAGTGATGTCAAATAGTTAAAGTAAAGAGATTTTAAAGTATAATGTGCTTTTATTTCTTTT
TATTCATTTAAGGAGTGAGT

Downstream 100 bases:

>100_bases
GTCTCTAACTTCATATATGAAAATCATTGCAGTGCTTGGCTCAAGTGGAAGCGGCAAGAGTGCTCTTGCTCATCGCATAG
CAATGGAGCAAAATTGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLLFTPGPTPVPESIRNAMSEPTLHHRTPEFEAIFAQARKGLLEILKMPEVLMLASSGTGAMEACVCTFTQNKVLSINSG
KFGERFGKIAKAHKIPYTEIINDWDTPVSAKSVLEVLQKESEIDCFCIQMCESAGGLRHPVEEIAQAIKAHNPRIVVVVD
AITAMGVEEIDTTYIDALIGGSQKAFMLPPGLSIIGLSHYAIELANERNIGFYFNLKTELKNQAQNTTAWTAPTTIITGL
TRYFELINGNMQQVYAQTKARSLATQKALESLGLKIYPKSPAIAMNTIYDEVNAAPLRKILKNEFALNVAGGQDKLKTSI
IRINQMGLIALNESVWVVNAIELALERLNLRKFDGTGNKVFLTTYYEILDK

Sequences:

>Translated_371_residues
MLLFTPGPTPVPESIRNAMSEPTLHHRTPEFEAIFAQARKGLLEILKMPEVLMLASSGTGAMEACVCTFTQNKVLSINSG
KFGERFGKIAKAHKIPYTEIINDWDTPVSAKSVLEVLQKESEIDCFCIQMCESAGGLRHPVEEIAQAIKAHNPRIVVVVD
AITAMGVEEIDTTYIDALIGGSQKAFMLPPGLSIIGLSHYAIELANERNIGFYFNLKTELKNQAQNTTAWTAPTTIITGL
TRYFELINGNMQQVYAQTKARSLATQKALESLGLKIYPKSPAIAMNTIYDEVNAAPLRKILKNEFALNVAGGQDKLKTSI
IRINQMGLIALNESVWVVNAIELALERLNLRKFDGTGNKVFLTTYYEILDK
>Mature_371_residues
MLLFTPGPTPVPESIRNAMSEPTLHHRTPEFEAIFAQARKGLLEILKMPEVLMLASSGTGAMEACVCTFTQNKVLSINSG
KFGERFGKIAKAHKIPYTEIINDWDTPVSAKSVLEVLQKESEIDCFCIQMCESAGGLRHPVEEIAQAIKAHNPRIVVVVD
AITAMGVEEIDTTYIDALIGGSQKAFMLPPGLSIIGLSHYAIELANERNIGFYFNLKTELKNQAQNTTAWTAPTTIITGL
TRYFELINGNMQQVYAQTKARSLATQKALESLGLKIYPKSPAIAMNTIYDEVNAAPLRKILKNEFALNVAGGQDKLKTSI
IRINQMGLIALNESVWVVNAIELALERLNLRKFDGTGNKVFLTTYYEILDK

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=372, Percent_Identity=23.1182795698925, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17536281, Length=373, Percent_Identity=25.201072386059, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321079, Length=381, Percent_Identity=24.9343832020997, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17530823, Length=358, Percent_Identity=21.5083798882682, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 40950; Mature: 40950

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFTPGPTPVPESIRNAMSEPTLHHRTPEFEAIFAQARKGLLEILKMPEVLMLASSGTG
CEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
AMEACVCTFTQNKVLSINSGKFGERFGKIAKAHKIPYTEIINDWDTPVSAKSVLEVLQKE
HHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCC
SEIDCFCIQMCESAGGLRHPVEEIAQAIKAHNPRIVVVVDAITAMGVEEIDTTYIDALIG
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHHHHHC
GSQKAFMLPPGLSIIGLSHYAIELANERNIGFYFNLKTELKNQAQNTTAWTAPTTIITGL
CCCCEEECCCCCCEEECHHEEEEECCCCCCEEEEEEEHHHHHCCCCCEEECCHHHHHHHH
TRYFELINGNMQQVYAQTKARSLATQKALESLGLKIYPKSPAIAMNTIYDEVNAAPLRKI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHCCHHHHHHH
LKNEFALNVAGGQDKLKTSIIRINQMGLIALNESVWVVNAIELALERLNLRKFDGTGNKV
HHHHHEEEECCCHHHHHHHHEEEECCEEEEECCCEEEHHHHHHHHHHHCCEEECCCCCEE
FLTTYYEILDK
EEEEHHHHHCC
>Mature Secondary Structure
MLLFTPGPTPVPESIRNAMSEPTLHHRTPEFEAIFAQARKGLLEILKMPEVLMLASSGTG
CEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
AMEACVCTFTQNKVLSINSGKFGERFGKIAKAHKIPYTEIINDWDTPVSAKSVLEVLQKE
HHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCC
SEIDCFCIQMCESAGGLRHPVEEIAQAIKAHNPRIVVVVDAITAMGVEEIDTTYIDALIG
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHHHHHC
GSQKAFMLPPGLSIIGLSHYAIELANERNIGFYFNLKTELKNQAQNTTAWTAPTTIITGL
CCCCEEECCCCCCEEECHHEEEEECCCCCCEEEEEEEHHHHHCCCCCEEECCHHHHHHHH
TRYFELINGNMQQVYAQTKARSLATQKALESLGLKIYPKSPAIAMNTIYDEVNAAPLRKI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHCCHHHHHHH
LKNEFALNVAGGQDKLKTSIIRINQMGLIALNESVWVVNAIELALERLNLRKFDGTGNKV
HHHHHEEEECCCHHHHHHHHEEEECCEEEEECCCEEEHHHHHHHHHHHCCEEECCCCCEE
FLTTYYEILDK
EEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]