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The map label for this gene is yycB [H]

Identifier: 32266364

GI number: 32266364

Start: 845046

End: 846215

Strand: Direct

Name: yycB [H]

Synonym: HH0865

Alternate gene names: 32266364

Gene position: 845046-846215 (Clockwise)

Preceding gene: 32266357

Following gene: 32266365

Centisome position: 46.97

GC content: 35.98

Gene sequence:

>1170_bases
ATGACATTGCACAAAAAAATCTTTCTTATTAATCTTTTACCTATTTTGCTTATCAGCCTTAACCTCCGCGCACCTATTAC
TTCTGTGGGACCTGTGGTAGATTTAATTAAAGATTATTATCATTTAAGTGCCGCTCAAGCAGGATTACTCACTTCTTTAC
CGCTTTTTGCATTTGGCATTGTCTCTTTTATAGTAGCAATTTTTCAACCTACAAGGGCAATGCTTTTTGGGCTTTTATGT
ATCAGTATTGGTGAGATTATTCGCTGTATCGGTGGAAGTATAGAGCTTTTTATTGGCACTGCAATTATGGGAAGCGGTAT
TGCAGTAGCAAATGTGCTTCTTCCTAGCTTTGTTAAAGCAAAATTTCCACGCGATGTGCCTAAAATAATGGGTATTTATA
GCCTTGTGATTAATATCTCTGCCACACTTGGCATTGCAGCGATTTTGCCACTTATTCATCTTATGTCTGTGCCTATAGCG
ATGGGCTGTTGGATAATTTTGGCAATAATGGCAATTCTTAGCTATCTCCCTCAAATTAAAAATCATAGAATCTCACGCAA
AAAAGTTAAGATTCATCTCAAAGGCACACTTTGGACAAACTTGAGTGCGTGGAATATCTCGCTTTTTATGGGATTTACAA
GCACAATTGCTTATAGTTTTTTTACTTGGTATCCTAGCTTTATCATTTCTTTTGGCTATAGTCAAACTTTTGCCTCAAAT
ATAATGATACTTGCCCAAATGATTGTGATTCCCGCCTCTTTTTTAGCACCGCTTATGCTTGGCTCACTCACACATAAACA
AAAAGGAATATTTATAGGTGCGATTTGTGGGCTGTATATACTTAGCTTTTCTCTTTTGCTTTATACACATAATTTATGGG
TAATTGTGCTTGTTTCAATACTTATAGGAATCCCTGTAGGAGGAGTATTTGGCATTGCCTTACTTTTTATTTCAAATAAA
AGTGCGAATGTGCAAATTGCCACAAAACTTTCTGCTATGGCACAAGGTATAGGCTATCTTCTTGCTTCACTTGGTCCTGT
GCTTATTGGCAGATTCTATGACTTATACCAAAACTTTACATATTCGCTTATCGCACTTTTATTTTTAAGTGTAATACTGA
ATGTTATTGGCTTTTTAGCATATAAATCTCCCCAAATACAATCCTCTTGA

Upstream 100 bases:

>100_bases
ATAATTACTTAATAATATAAATTTATAAGCTTAAGATAATTTTTTAAAGATTTATACTCATTTTATACAATACACAAAGA
AAGCTTTATAAGGAAATTAA

Downstream 100 bases:

>100_bases
TTTGTTTTTAAATTAAAATTTATTAATATACACATTTAATTTGCACTCAGGAATATTAAAGATGAAAATGTTAAAGTTGG
TTTTTACTTTGGGATTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTLHKKIFLINLLPILLISLNLRAPITSVGPVVDLIKDYYHLSAAQAGLLTSLPLFAFGIVSFIVAIFQPTRAMLFGLLC
ISIGEIIRCIGGSIELFIGTAIMGSGIAVANVLLPSFVKAKFPRDVPKIMGIYSLVINISATLGIAAILPLIHLMSVPIA
MGCWIILAIMAILSYLPQIKNHRISRKKVKIHLKGTLWTNLSAWNISLFMGFTSTIAYSFFTWYPSFIISFGYSQTFASN
IMILAQMIVIPASFLAPLMLGSLTHKQKGIFIGAICGLYILSFSLLLYTHNLWVIVLVSILIGIPVGGVFGIALLFISNK
SANVQIATKLSAMAQGIGYLLASLGPVLIGRFYDLYQNFTYSLIALLFLSVILNVIGFLAYKSPQIQSS

Sequences:

>Translated_389_residues
MTLHKKIFLINLLPILLISLNLRAPITSVGPVVDLIKDYYHLSAAQAGLLTSLPLFAFGIVSFIVAIFQPTRAMLFGLLC
ISIGEIIRCIGGSIELFIGTAIMGSGIAVANVLLPSFVKAKFPRDVPKIMGIYSLVINISATLGIAAILPLIHLMSVPIA
MGCWIILAIMAILSYLPQIKNHRISRKKVKIHLKGTLWTNLSAWNISLFMGFTSTIAYSFFTWYPSFIISFGYSQTFASN
IMILAQMIVIPASFLAPLMLGSLTHKQKGIFIGAICGLYILSFSLLLYTHNLWVIVLVSILIGIPVGGVFGIALLFISNK
SANVQIATKLSAMAQGIGYLLASLGPVLIGRFYDLYQNFTYSLIALLFLSVILNVIGFLAYKSPQIQSS
>Mature_388_residues
TLHKKIFLINLLPILLISLNLRAPITSVGPVVDLIKDYYHLSAAQAGLLTSLPLFAFGIVSFIVAIFQPTRAMLFGLLCI
SIGEIIRCIGGSIELFIGTAIMGSGIAVANVLLPSFVKAKFPRDVPKIMGIYSLVINISATLGIAAILPLIHLMSVPIAM
GCWIILAIMAILSYLPQIKNHRISRKKVKIHLKGTLWTNLSAWNISLFMGFTSTIAYSFFTWYPSFIISFGYSQTFASNI
MILAQMIVIPASFLAPLMLGSLTHKQKGIFIGAICGLYILSFSLLLYTHNLWVIVLVSILIGIPVGGVFGIALLFISNKS
ANVQIATKLSAMAQGIGYLLASLGPVLIGRFYDLYQNFTYSLIALLFLSVILNVIGFLAYKSPQIQSS

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=395, Percent_Identity=31.8987341772152, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1786536, Length=389, Percent_Identity=25.4498714652956, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42369; Mature: 42238

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHKKIFLINLLPILLISLNLRAPITSVGPVVDLIKDYYHLSAAQAGLLTSLPLFAFGI
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFIVAIFQPTRAMLFGLLCISIGEIIRCIGGSIELFIGTAIMGSGIAVANVLLPSFVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHHHH
KFPRDVPKIMGIYSLVINISATLGIAAILPLIHLMSVPIAMGCWIILAIMAILSYLPQIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHRISRKKVKIHLKGTLWTNLSAWNISLFMGFTSTIAYSFFTWYPSFIISFGYSQTFASN
CCCCCCEEEEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IMILAQMIVIPASFLAPLMLGSLTHKQKGIFIGAICGLYILSFSLLLYTHNLWVIVLVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGIPVGGVFGIALLFISNKSANVQIATKLSAMAQGIGYLLASLGPVLIGRFYDLYQNFT
HHHCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSLIALLFLSVILNVIGFLAYKSPQIQSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLHKKIFLINLLPILLISLNLRAPITSVGPVVDLIKDYYHLSAAQAGLLTSLPLFAFGI
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFIVAIFQPTRAMLFGLLCISIGEIIRCIGGSIELFIGTAIMGSGIAVANVLLPSFVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHHHH
KFPRDVPKIMGIYSLVINISATLGIAAILPLIHLMSVPIAMGCWIILAIMAILSYLPQIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHRISRKKVKIHLKGTLWTNLSAWNISLFMGFTSTIAYSFFTWYPSFIISFGYSQTFASN
CCCCCCEEEEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IMILAQMIVIPASFLAPLMLGSLTHKQKGIFIGAICGLYILSFSLLLYTHNLWVIVLVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGIPVGGVFGIALLFISNKSANVQIATKLSAMAQGIGYLLASLGPVLIGRFYDLYQNFT
HHHCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSLIALLFLSVILNVIGFLAYKSPQIQSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]