Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is yibP [C]

Identifier: 32266287

GI number: 32266287

Start: 764353

End: 765624

Strand: Direct

Name: yibP [C]

Synonym: HH0788

Alternate gene names: 32266287

Gene position: 764353-765624 (Clockwise)

Preceding gene: 32266286

Following gene: 32266288

Centisome position: 42.48

GC content: 32.7

Gene sequence:

>1272_bases
TTGTATCTATCGTCTCGGTGGTTTTTGTCATTATTAAACAAAAAGACCTGTGAATCTAATATGAGGGGTTTTGGTTGGAT
TGCAATATGTGCCATTATAAATATATGTATGGCAAATATTGACCAAGATATTGCAAAAAATAAAGATAAACTTGCTACTG
CCAAATCCCAAGAAAAAGCTATTAGCAAAAAACTTGATGTTTTGGGCAAAGCAATTAATGCGAAAAATTCTGAGCTCACA
CAACTTGGGAATCAAATTAACGCCTTAGAAAAAGATATAGAACAAAATCAAGGCAAATCTCTCTCACAAGAAAAATCACT
TAAAGATTCTCAAAAAAAACAAAATGTGCTTGTAGAACAAAAACTTCAGATTGAAAAACAACTTATTAAGCTTATTGCAC
AAGGTATTGCTTTTAATATGGTGATTAGCCGCTCTGCAGATATTGATTCTGTTGATGGTGTAGTGCAATATCATATTTAT
CAAATTCTACATAAAAACGCGCGCAACTCTATTAAAACGCTTAACGCTAAACACAATCTCCTCAATAATGAAATCAAACA
AATAAGTAATGCAATTTCTCAAATTCAAAGCTCCATTAAAACTCAAACTAATAAAAAAGAACGTCTCCAAATCGCAAAAG
AACAACAAAAAGCCACTCTTGCAAAAATGCAAACTGAACTTAAAACCTATGACCAGCAGCTTAAAGACATTGTCAAAGAG
CGCAAAAGCCTTGATGAGATTCTCTCAAAACTCAATATCGTTAAAGAGCAAAAACAACAAGGCTCCAATCAGCAAGCCTT
TATAAATAACCAAAAAAACCCAAGTAGTATTAAAGCCCCAAAACAATTTGGCACTTCATATCGTGATGTGCCTACCATTG
CCTACAAAGGAGCTAAAACCTTTTCACCACTTGATAACTATGTCATTGAAAAAAAGTTTGGACCTTATTTTGACCCTGTA
TATAAATTTAAAATTTTTAATGCTGCAATTATGCTTAATCCCAAATCTCCCAACGCTCCTGTCAAGAATGTGCTTGATGG
GAGAATAGTATATGCCAAAGAAGCACCAGGGCTTAAAAAAGTTGTTATTATTGAGCATAACAATGCTATCCATACTATTT
ACGCATATATGGACAAAATAGAATCTTCAATTAAAACAGGTATACCTATTAAAAAAGGCACGATTATTGGCAAAGTCAAT
GAACGTTTAAGCTTTGAAATCACTCAAAAAGATAAACATATTAACCCTGCAGATTTTATAAAACTCAACTAA

Upstream 100 bases:

>100_bases
AACCACGACAAAATGCAAGAAGTGTTTCACACGCTTGAAGTAACAAGCGATATATTCCGTATGGGAAGTGATTTTATCAT
TCTTCTTTTTACATCTATAC

Downstream 100 bases:

>100_bases
AAAAATAAAATTTTTATCCGATGTATCCTTGTATTTAACTTCAAGGAGGAAGCTATGCTTAATGATATTAATAGCGTTAA
TAGCACCAATAATACCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase M; Peptidase; Metallopeptidase; Transaldolase; M23 Peptidase Domain Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MYLSSRWFLSLLNKKTCESNMRGFGWIAICAIINICMANIDQDIAKNKDKLATAKSQEKAISKKLDVLGKAINAKNSELT
QLGNQINALEKDIEQNQGKSLSQEKSLKDSQKKQNVLVEQKLQIEKQLIKLIAQGIAFNMVISRSADIDSVDGVVQYHIY
QILHKNARNSIKTLNAKHNLLNNEIKQISNAISQIQSSIKTQTNKKERLQIAKEQQKATLAKMQTELKTYDQQLKDIVKE
RKSLDEILSKLNIVKEQKQQGSNQQAFINNQKNPSSIKAPKQFGTSYRDVPTIAYKGAKTFSPLDNYVIEKKFGPYFDPV
YKFKIFNAAIMLNPKSPNAPVKNVLDGRIVYAKEAPGLKKVVIIEHNNAIHTIYAYMDKIESSIKTGIPIKKGTIIGKVN
ERLSFEITQKDKHINPADFIKLN

Sequences:

>Translated_423_residues
MYLSSRWFLSLLNKKTCESNMRGFGWIAICAIINICMANIDQDIAKNKDKLATAKSQEKAISKKLDVLGKAINAKNSELT
QLGNQINALEKDIEQNQGKSLSQEKSLKDSQKKQNVLVEQKLQIEKQLIKLIAQGIAFNMVISRSADIDSVDGVVQYHIY
QILHKNARNSIKTLNAKHNLLNNEIKQISNAISQIQSSIKTQTNKKERLQIAKEQQKATLAKMQTELKTYDQQLKDIVKE
RKSLDEILSKLNIVKEQKQQGSNQQAFINNQKNPSSIKAPKQFGTSYRDVPTIAYKGAKTFSPLDNYVIEKKFGPYFDPV
YKFKIFNAAIMLNPKSPNAPVKNVLDGRIVYAKEAPGLKKVVIIEHNNAIHTIYAYMDKIESSIKTGIPIKKGTIIGKVN
ERLSFEITQKDKHINPADFIKLN
>Mature_423_residues
MYLSSRWFLSLLNKKTCESNMRGFGWIAICAIINICMANIDQDIAKNKDKLATAKSQEKAISKKLDVLGKAINAKNSELT
QLGNQINALEKDIEQNQGKSLSQEKSLKDSQKKQNVLVEQKLQIEKQLIKLIAQGIAFNMVISRSADIDSVDGVVQYHIY
QILHKNARNSIKTLNAKHNLLNNEIKQISNAISQIQSSIKTQTNKKERLQIAKEQQKATLAKMQTELKTYDQQLKDIVKE
RKSLDEILSKLNIVKEQKQQGSNQQAFINNQKNPSSIKAPKQFGTSYRDVPTIAYKGAKTFSPLDNYVIEKKFGPYFDPV
YKFKIFNAAIMLNPKSPNAPVKNVLDGRIVYAKEAPGLKKVVIIEHNNAIHTIYAYMDKIESSIKTGIPIKKGTIIGKVN
ERLSFEITQKDKHINPADFIKLN

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47829; Mature: 47829

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECC
>Mature Secondary Structure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ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA