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The map label for this gene is fliR

Identifier: 32266203

GI number: 32266203

Start: 683806

End: 684582

Strand: Direct

Name: fliR

Synonym: HH0704

Alternate gene names: 32266203

Gene position: 683806-684582 (Clockwise)

Preceding gene: 32266202

Following gene: 32266205

Centisome position: 38.01

GC content: 35.65

Gene sequence:

>777_bases
ATGGAGCTTGTCGCTTATCTTACTCAACCAAATAGTGTTGCTGTATTTTTATTACTCATAGCACGTTTTGGTGGTGTATT
TGCGTTTTTTCCATTTTTTGACAATCAACTTATTAGTATTCATATCCGTGCGGCAATGGTATTTTTTATGAGTGTGGCAT
TTTTTCCTCTTGCAACCTATACGCTGCCTGATATGACTATGGTAGAGTTTCTTATTGCTGCACTTTTTGAAATTATGCTA
GGATTCATTGCTTCAGTATGTTTGCAAATTGTTTTTGCAATGTTAAGTTTTGGCGGCGAAATTATCAGTTTCACAATGGG
ATTCACTATGGCAAGTGCATATGACCCTGTGAGTGGAACACAAAAACCCATTATTGCGCAACTTATAGCCATTATAGGCT
TACTTGTCGCTTTAAGTCTTGATTTTCATCATACTATTTTTCTTATCATCTCTCATAGCATTGAAGCTACGCCATTGGGG
GGCTTTGTATTTGAGCCAAAAAGTGCAGCTTATTTTGTCAAAGCCTTTAGTAATATTTTTGCTGTGGGCTTTTCTATGGC
ATTTCCCATTCTCGCAATTATCTTGCTCTCTGATATTATCTTTGGTATGATTATGAAAACCCACCCGCAATTCAATCTCC
TTGTTATAGGTTTTCCTGTAAAAATTGCCATTGCCTTTGTCGTGCTTGTGCTTACAATTTCTACAATTATGTATACTTTC
AAAAATGAACTTAAAAATGCTTTTTTTGCGGTAGGGAAAATTTTTTTAGGGCAATAA

Upstream 100 bases:

>100_bases
CTCTCGCTCTTTATGAGCAAGGAATGCAAAGTCTTAAAAACGCTCAAGAAATTTTAGAACAAGCCAAATTGCAGTATCAA
GAATTTAAAGATTAGATTCT

Downstream 100 bases:

>100_bases
ATTAGAATCCTACACACGCTCTTGTCATTTTTTCATAACCTTGCAGTGCCTTTTGCACAAAGCGTTGATTATGGCTTATA
AGTAATGTTTCAAAATTATT

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MELVAYLTQPNSVAVFLLLIARFGGVFAFFPFFDNQLISIHIRAAMVFFMSVAFFPLATYTLPDMTMVEFLIAALFEIML
GFIASVCLQIVFAMLSFGGEIISFTMGFTMASAYDPVSGTQKPIIAQLIAIIGLLVALSLDFHHTIFLIISHSIEATPLG
GFVFEPKSAAYFVKAFSNIFAVGFSMAFPILAIILLSDIIFGMIMKTHPQFNLLVIGFPVKIAIAFVVLVLTISTIMYTF
KNELKNAFFAVGKIFLGQ

Sequences:

>Translated_258_residues
MELVAYLTQPNSVAVFLLLIARFGGVFAFFPFFDNQLISIHIRAAMVFFMSVAFFPLATYTLPDMTMVEFLIAALFEIML
GFIASVCLQIVFAMLSFGGEIISFTMGFTMASAYDPVSGTQKPIIAQLIAIIGLLVALSLDFHHTIFLIISHSIEATPLG
GFVFEPKSAAYFVKAFSNIFAVGFSMAFPILAIILLSDIIFGMIMKTHPQFNLLVIGFPVKIAIAFVVLVLTISTIMYTF
KNELKNAFFAVGKIFLGQ
>Mature_258_residues
MELVAYLTQPNSVAVFLLLIARFGGVFAFFPFFDNQLISIHIRAAMVFFMSVAFFPLATYTLPDMTMVEFLIAALFEIML
GFIASVCLQIVFAMLSFGGEIISFTMGFTMASAYDPVSGTQKPIIAQLIAIIGLLVALSLDFHHTIFLIISHSIEATPLG
GFVFEPKSAAYFVKAFSNIFAVGFSMAFPILAIILLSDIIFGMIMKTHPQFNLLVIGFPVKIAIAFVVLVLTISTIMYTF
KNELKNAFFAVGKIFLGQ

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28386; Mature: 28386

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVAYLTQPNSVAVFLLLIARFGGVFAFFPFFDNQLISIHIRAAMVFFMSVAFFPLATY
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH
TLPDMTMVEFLIAALFEIMLGFIASVCLQIVFAMLSFGGEIISFTMGFTMASAYDPVSGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
QKPIIAQLIAIIGLLVALSLDFHHTIFLIISHSIEATPLGGFVFEPKSAAYFVKAFSNIF
CCHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCCEEECCCCHHHHHHHHHHHH
AVGFSMAFPILAIILLSDIIFGMIMKTHPQFNLLVIGFPVKIAIAFVVLVLTISTIMYTF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
KNELKNAFFAVGKIFLGQ
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELVAYLTQPNSVAVFLLLIARFGGVFAFFPFFDNQLISIHIRAAMVFFMSVAFFPLATY
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH
TLPDMTMVEFLIAALFEIMLGFIASVCLQIVFAMLSFGGEIISFTMGFTMASAYDPVSGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
QKPIIAQLIAIIGLLVALSLDFHHTIFLIISHSIEATPLGGFVFEPKSAAYFVKAFSNIF
CCHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCCEEECCCCHHHHHHHHHHHH
AVGFSMAFPILAIILLSDIIFGMIMKTHPQFNLLVIGFPVKIAIAFVVLVLTISTIMYTF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
KNELKNAFFAVGKIFLGQ
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]