Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266056

Identifier: 32266056

GI number: 32266056

Start: 534065

End: 535198

Strand: Direct

Name: 32266056

Synonym: HH0557

Alternate gene names: NA

Gene position: 534065-535198 (Clockwise)

Preceding gene: 32266039

Following gene: 32266057

Centisome position: 29.68

GC content: 38.18

Gene sequence:

>1134_bases
ATGAAACAACTTAAAGACATCAAAGCAGTTTGTGATTTTATAAAAGAACGACCCTACTCAGCAGAGAAGTTTGGCTTTTA
TGTAGAACATTTGCAACAAGCGTTGGAGGGCTTAAAGCAAATCCTTGAAAGCAAGAAAAATAAGAAAATCAGCGATAAAG
ATTTAGCTAGAGTGCTTAAATGTATAAACAATACAGAATACTTTGTGAGGATAGAAGAAAAAACCACCAAAACAAAGTAT
GCGCTTGAATGTGCGCCTTTAGAGCTTGTAGAATTTATTATCCAAAACGCACAGGATAAAGACTTTTTGCTTTCGCAAAA
GGGTGGCAAAAAAAGCCGTGATTTTTTAGCAAGTGCCTTAGATGGTGGCAGGGTAGATATTGCAGAACTTCTTATCAAAA
ATGGCGTGGAATTTAAGCAAGATTATTTAAAGGAGCTAAGATATGCTTGGCGTGATATACTTGACATTGAGGCGCAAACG
AAAGAATTTGAGTGTTTAGGGATAAAAAAGGGAGAGACTTTAAAAAAGATATGGGATTTGCTAAGCCCTTTTAGTATTGG
TGAAATTTACACCGAGGCGTTTTCTTATTACAATGCGGTGCATAATTACAGAGACACTTTTACAGGAGCGCAGCAAGTTT
TTATCTACGCACTTAAAAACAAGCTTTTTAGCGAGGAAGTGCTAGATAATAGCTTCTTTGCTTTGCCAAAAGCGGGGCTA
AGTTTGTTTTTAAACGCAAAAGACCTTAAAGGGCTTAGCAACGATGATGTATATACCAAGCCAAAGGGAGAAATTGTGCC
TTTTGTCTTTGCGATGTTTGAGGATGAAACCTTAGAAGTGCTAGAATACGCACTCTTTCTTGGGCTTCACAAGGGCAGAA
AAAACGCGCAGGGCAAGGACTTTGAGAGCTTTTTGCAAGGCAAGATTGAGGAGTATAAAATCCTCACCACAAAGGGAAAC
AAGTATGGCACGATATTTGAAGAGGACGAGTGGGATTTGGCTTATTTTCTTTCTTTGCAAAAATTTATGCAAGGTTTAGA
AAGCCTTGAAAAAGGTGAAGCGGTTGTGGTAGATGATGAGACTTCCAAGATGTTTGCGAGGATTGAGGAAATCCCGCAAA
ATCTCTTAGTATAA

Upstream 100 bases:

>100_bases
ATGCAATTTTTAGAATCTTTTGTCTGCGGATTCAACGCCTGGACTTGATTACAAAAAAACAATATAATGTAGCACGCAAG
AATGATTCAAGGGAGAAAAA

Downstream 100 bases:

>100_bases
GATTGTAAGGCTTTAAGCAAAGGGCATTCTCCATTTTCGCCTTTAATGTTTAGCTCATAGCAAGATATTTGCGTAGGATA
ATCTTTTAAAATATCCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY
ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT
KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL
SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN
KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV

Sequences:

>Translated_377_residues
MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY
ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT
KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL
SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN
KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV
>Mature_377_residues
MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY
ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT
KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL
SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN
KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43458; Mature: 43458

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
CINNTEYFVRIEEKTTKTKYALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASAL
HHCCCEEEEEEECCCCCHHHEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC
DGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQTKEFECLGIKKGETLKKIWDL
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
LSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCH
SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKD
HEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
FESFLQGKIEEYKILTTKGNKYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDE
HHHHHCCCHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC
TSKMFARIEEIPQNLLV
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
CINNTEYFVRIEEKTTKTKYALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASAL
HHCCCEEEEEEECCCCCHHHEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC
DGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQTKEFECLGIKKGETLKKIWDL
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
LSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCH
SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKD
HEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
FESFLQGKIEEYKILTTKGNKYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDE
HHHHHCCCHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC
TSKMFARIEEIPQNLLV
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA