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The map label for this gene is ssb

Identifier: 32266036

GI number: 32266036

Start: 518865

End: 519377

Strand: Direct

Name: ssb

Synonym: HH0537

Alternate gene names: 32266036

Gene position: 518865-519377 (Clockwise)

Preceding gene: 32266035

Following gene: 161546631

Centisome position: 28.84

GC content: 38.99

Gene sequence:

>513_bases
ATGTATAATAAGGTGATTATAATAGGAAATCTTACACGAGATGTGGAACTCCGATATTTGCCTAGTGGGAGCGCTCTAGC
TACCATTGGATTAGCAAGCAATAGGAGATTCAAAAAGCAAGATGGCTCTCAAGGTGAAGAAGTATGCTTTATAGATGTAA
AGCTTTTTGGGCGCAGTGCAGAGGTAGCAAATCAATATTTGCGCAAGGGAAGCAAGATTCTCATTGAAGGACGTTTGAGT
TTAGAATCGTGGAACGACCAAAGCGGTGCAAAACGAAGTAGGCATACCATTACTGCAGAAAGTATGCAAATGCTAGATTC
TAAACCTAGTGGAGATGAGAACCCTTATAACAATACAAATGCCTCTAATACAGGAATGCAACATAATACCAATAACTCAC
CAAACTATAATCAAACTCACTCGCAGCCACAAGGAAATGGGAATATTGGGACAGGAAACTATCCTCAAAATATCCCCGAA
ATCAACATTGATGATGAAGATATACCTTTTTAA

Upstream 100 bases:

>100_bases
ATAAACCAGAACCCAAACCCACAAAAGCTAAAAAAGAAGATGTTGCCCCAGAGGCTAAAGAGCAAGCCCAGACAGAGGCT
TAATACGAGTGAGAAGCTAG

Downstream 100 bases:

>100_bases
TAAACACAAGGAGCAATAATGGAAAAGAAAAAATACTCAAAACGATACTGCCGATATACCGAAGCAAAGCTTGAATATAT
TGATTACAAAGATGTGGAAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MYNKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSAEVANQYLRKGSKILIEGRLS
LESWNDQSGAKRSRHTITAESMQMLDSKPSGDENPYNNTNASNTGMQHNTNNSPNYNQTHSQPQGNGNIGTGNYPQNIPE
INIDDEDIPF

Sequences:

>Translated_170_residues
MYNKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSAEVANQYLRKGSKILIEGRLS
LESWNDQSGAKRSRHTITAESMQMLDSKPSGDENPYNNTNASNTGMQHNTNNSPNYNQTHSQPQGNGNIGTGNYPQNIPE
INIDDEDIPF
>Mature_170_residues
MYNKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSAEVANQYLRKGSKILIEGRLS
LESWNDQSGAKRSRHTITAESMQMLDSKPSGDENPYNNTNASNTGMQHNTNNSPNYNQTHSQPQGNGNIGTGNYPQNIPE
INIDDEDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=177, Percent_Identity=36.1581920903955, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_HELHP (P59931)

Other databases:

- EMBL:   AE017125
- RefSeq:   NP_860068.1
- ProteinModelPortal:   P59931
- SMR:   P59931
- GeneID:   1493591
- GenomeReviews:   AE017125_GR
- KEGG:   hhe:HH0537
- NMPDR:   fig|235279.1.peg.537
- HOGENOM:   HBG755544
- OMA:   GHIYEYK
- ProtClustDB:   PRK08486
- BioCyc:   HHEP235279:HH_0537-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18849; Mature: 18849

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSA
CCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCH
EVANQYLRKGSKILIEGRLSLESWNDQSGAKRSRHTITAESMQMLDSKPSGDENPYNNTN
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCCC
ASNTGMQHNTNNSPNYNQTHSQPQGNGNIGTGNYPQNIPEINIDDEDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYNKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSA
CCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCH
EVANQYLRKGSKILIEGRLSLESWNDQSGAKRSRHTITAESMQMLDSKPSGDENPYNNTN
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCCC
ASNTGMQHNTNNSPNYNQTHSQPQGNGNIGTGNYPQNIPEINIDDEDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954