| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is hisH
Identifier: 32265984
GI number: 32265984
Start: 470499
End: 471152
Strand: Direct
Name: hisH
Synonym: HH0485
Alternate gene names: 32265984
Gene position: 470499-471152 (Clockwise)
Preceding gene: 32265983
Following gene: 32265985
Centisome position: 26.15
GC content: 37.31
Gene sequence:
>654_bases ATGAGTAAGCTTCGTGTTGGTATTATTAATTATGGTGTAGGGAATCTCGGCAGTGTGCAAAATGCTTTTGCTTTTATACA AACACATTTTAGCGATGTATTACCACACACACTTGAAATAAAGGTAGAATCTCACCCTGAAAGGCTACAAGATTACGATA AACTCTTATTGCCGGGTGTTGGAGCATTTGGCAATGCAATGACACATTTAAAAAACACTCATTTAGATGAGGCTATCAGA GAATTTGTCCAAAGCGGCAAATTCTTAATTGGGATTTGTTTAGGTATGCAACTGCTTTTTGAGCAAAGTGAAGAATTTGG CAATCACAAAGGATTAGGACTTATTGAGGGCAAAGTAGTAGGATTTGAACATATTGCACCACTAAAAGTGCCACATATTG GGTGGAATAGCTGTAATTTTACTCCTGAAGGCAAACATTCAAAGCTTTTTAGGGGTATTGCTGATGGAAGCTTTTTTTAT TTCGTGCATAGCTTTCATATTCAAACACAACCTCAATTTATCCTTGCTCAATGCACCTATGGCTATCCTTTTGGTGCGAT TGTCCATAAAGATAATCTTTTTGCCATACAAGCTCACCCCGAAAAAAGCCATAACGTAGGTTTAAGGCTTCTTGCAAATT TCCTTACCTTATGA
Upstream 100 bases:
>100_bases ACTCTCTCTTGTGTAGATTTAGAAAATGTGCGTGATAATCTCTTACAAAAAAGCAATGATGTAATTGCACAAAATAAACA ATGGCTTTTAGGACTTGTCA
Downstream 100 bases:
>100_bases AACATTGCTTTTCCATTTACCTAGTTGTTGTTTTAGTTAATTATAGTAATGGAAAATTTTTATTATTTGTAAGGAGAAAA ATATGATTGATTTAGCAATT
Product: glutamine amidotransferase HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSKLRVGIINYGVGNLGSVQNAFAFIQTHFSDVLPHTLEIKVESHPERLQDYDKLLLPGVGAFGNAMTHLKNTHLDEAIR EFVQSGKFLIGICLGMQLLFEQSEEFGNHKGLGLIEGKVVGFEHIAPLKVPHIGWNSCNFTPEGKHSKLFRGIADGSFFY FVHSFHIQTQPQFILAQCTYGYPFGAIVHKDNLFAIQAHPEKSHNVGLRLLANFLTL
Sequences:
>Translated_217_residues MSKLRVGIINYGVGNLGSVQNAFAFIQTHFSDVLPHTLEIKVESHPERLQDYDKLLLPGVGAFGNAMTHLKNTHLDEAIR EFVQSGKFLIGICLGMQLLFEQSEEFGNHKGLGLIEGKVVGFEHIAPLKVPHIGWNSCNFTPEGKHSKLFRGIADGSFFY FVHSFHIQTQPQFILAQCTYGYPFGAIVHKDNLFAIQAHPEKSHNVGLRLLANFLTL >Mature_216_residues SKLRVGIINYGVGNLGSVQNAFAFIQTHFSDVLPHTLEIKVESHPERLQDYDKLLLPGVGAFGNAMTHLKNTHLDEAIRE FVQSGKFLIGICLGMQLLFEQSEEFGNHKGLGLIEGKVVGFEHIAPLKVPHIGWNSCNFTPEGKHSKLFRGIADGSFFYF VHSFHIQTQPQFILAQCTYGYPFGAIVHKDNLFAIQAHPEKSHNVGLRLLANFLTL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI1788334, Length=214, Percent_Identity=40.1869158878505, Blast_Score=145, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319725, Length=222, Percent_Identity=35.1351351351351, Blast_Score=112, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS5_HELHP (Q7VIW9)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860016.1 - ProteinModelPortal: Q7VIW9 - GeneID: 1493539 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0485 - NMPDR: fig|235279.1.peg.485 - HOGENOM: HBG292341 - OMA: RPFFGIC - BioCyc: HHEP235279:HH_0485-MONOMER - GO: GO:0005737 - HAMAP: MF_00278 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 - PIRSF: PIRSF000495 - TIGRFAMs: TIGR01855
Pfam domain/function: PF00117 GATase
EC number: 2.4.2.-
Molecular weight: Translated: 24227; Mature: 24096
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 93-93 ACT_SITE 199-199 ACT_SITE 201-201
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLRVGIINYGVGNLGSVQNAFAFIQTHFSDVLPHTLEIKVESHPERLQDYDKLLLPGV CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCC GAFGNAMTHLKNTHLDEAIREFVQSGKFLIGICLGMQLLFEQSEEFGNHKGLGLIEGKVV CHHHHHHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEECCEEE GFEHIAPLKVPHIGWNSCNFTPEGKHSKLFRGIADGSFFYFVHSFHIQTQPQFILAQCTY CHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECC GYPFGAIVHKDNLFAIQAHPEKSHNVGLRLLANFLTL CCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SKLRVGIINYGVGNLGSVQNAFAFIQTHFSDVLPHTLEIKVESHPERLQDYDKLLLPGV CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCC GAFGNAMTHLKNTHLDEAIREFVQSGKFLIGICLGMQLLFEQSEEFGNHKGLGLIEGKVV CHHHHHHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEECCEEE GFEHIAPLKVPHIGWNSCNFTPEGKHSKLFRGIADGSFFYFVHSFHIQTQPQFILAQCTY CHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECC GYPFGAIVHKDNLFAIQAHPEKSHNVGLRLLANFLTL CCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954