| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is cheB
Identifier: 32265955
GI number: 32265955
Start: 437327
End: 438040
Strand: Direct
Name: cheB
Synonym: HH0456
Alternate gene names: 32265955
Gene position: 437327-438040 (Clockwise)
Preceding gene: 32265954
Following gene: 32265965
Centisome position: 24.31
GC content: 38.8
Gene sequence:
>714_bases ATGTTAATGGATACTATAAAATATCACCCTGACACAATTCTTAAAAGCAATCCTTGTAAAATCATACGCGATAAACTTGT CGTTATAGGAGCTTCCACTGGTGGTGTTGATGCACTTTCATATATTTTCTCTCGTCTCCCTGCACAACTACCTCCTATTG CTGTAGTGCAACATATCCCACCAAGTTTTGGCTCTTCATTTATCAAAAGGCTTGATACTCTTTCTCAACTTAGCATTTGC GAAGTTACTTCAAAAACACCTATGAAAGATAATTGTGTTTATATTGCAGGGGGTGATAAGCATATGATTATAGATTTTGC AATGGGTTCATATTACGCAAAATCACTTGATGAGAAACTACGTATTTCGCGTCATAAGCCAAGCGTAGATATCCTCTTCC GAAGCGCAAATAATACTGCTGGACGTTCTGCACTTGGCATAATCCTCACAGGTATGGGTGATGATGGCTGCATAGGACTT AAAGAACTTTATGATAATGGTGCGCACACTCTAGCAGAAAATGAAAAAGACTGCATAGTATTTGGTATGCCAAAAAAAGC GATTGAAATGGGTGCTGTGAGCGAAATTTTAAGTCTTGATGCAATAATCAAGCGCATTATTGATTATGCAAACACACCGC TTAAAGCTTTAATAAAAGAAGGGAGCGATAGCATTTCACCCCCCCCCCCCCCCGCAAATGAATTAAATCTCTAA
Upstream 100 bases:
>100_bases TGGCACATTTTATTTGGGACATTCTGAAACACTTTATCATCTCCAAGAAAAATTTGAAAAGCTTGGCAATAAAGCTTTTA TTAAAATCAAGGCGTAAATT
Downstream 100 bases:
>100_bases AATTCTAAAACAATCACTCAATGTATCCCACACAAAACTCTCTACCCTTGACAATGGGAGGATTTTTCTATATAATCGGG GCTTTTGTTTATTCCGGATT
Product: chemotaxis protein methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLMDTIKYHPDTILKSNPCKIIRDKLVVIGASTGGVDALSYIFSRLPAQLPPIAVVQHIPPSFGSSFIKRLDTLSQLSIC EVTSKTPMKDNCVYIAGGDKHMIIDFAMGSYYAKSLDEKLRISRHKPSVDILFRSANNTAGRSALGIILTGMGDDGCIGL KELYDNGAHTLAENEKDCIVFGMPKKAIEMGAVSEILSLDAIIKRIIDYANTPLKALIKEGSDSISPPPPPANELNL
Sequences:
>Translated_237_residues MLMDTIKYHPDTILKSNPCKIIRDKLVVIGASTGGVDALSYIFSRLPAQLPPIAVVQHIPPSFGSSFIKRLDTLSQLSIC EVTSKTPMKDNCVYIAGGDKHMIIDFAMGSYYAKSLDEKLRISRHKPSVDILFRSANNTAGRSALGIILTGMGDDGCIGL KELYDNGAHTLAENEKDCIVFGMPKKAIEMGAVSEILSLDAIIKRIIDYANTPLKALIKEGSDSISPPPPPANELNL >Mature_237_residues MLMDTIKYHPDTILKSNPCKIIRDKLVVIGASTGGVDALSYIFSRLPAQLPPIAVVQHIPPSFGSSFIKRLDTLSQLSIC EVTSKTPMKDNCVYIAGGDKHMIIDFAMGSYYAKSLDEKLRISRHKPSVDILFRSANNTAGRSALGIILTGMGDDGCIGL KELYDNGAHTLAENEKDCIVFGMPKKAIEMGAVSEILSLDAIIKRIIDYANTPLKALIKEGSDSISPPPPPANELNL
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=196, Percent_Identity=41.3265306122449, Blast_Score=168, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 25673; Mature: 25673
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMDTIKYHPDTILKSNPCKIIRDKLVVIGASTGGVDALSYIFSRLPAQLPPIAVVQHIP CCCCCCCCCCCCCCCCCCHHHEECEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHCC PSFGSSFIKRLDTLSQLSICEVTSKTPMKDNCVYIAGGDKHMIIDFAMGSYYAKSLDEKL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHH RISRHKPSVDILFRSANNTAGRSALGIILTGMGDDGCIGLKELYDNGAHTLAENEKDCIV HHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEHHHHHCCCCHHHCCCCCCEEE FGMPKKAIEMGAVSEILSLDAIIKRIIDYANTPLKALIKEGSDSISPPPPPANELNL EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLMDTIKYHPDTILKSNPCKIIRDKLVVIGASTGGVDALSYIFSRLPAQLPPIAVVQHIP CCCCCCCCCCCCCCCCCCHHHEECEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHCC PSFGSSFIKRLDTLSQLSICEVTSKTPMKDNCVYIAGGDKHMIIDFAMGSYYAKSLDEKL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHH RISRHKPSVDILFRSANNTAGRSALGIILTGMGDDGCIGLKELYDNGAHTLAENEKDCIV HHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEHHHHHCCCCHHHCCCCCCEEE FGMPKKAIEMGAVSEILSLDAIIKRIIDYANTPLKALIKEGSDSISPPPPPANELNL EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]