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The map label for this gene is glnP

Identifier: 32265844

GI number: 32265844

Start: 336946

End: 337605

Strand: Direct

Name: glnP

Synonym: HH0345

Alternate gene names: 32265844

Gene position: 336946-337605 (Clockwise)

Preceding gene: 32265843

Following gene: 32265845

Centisome position: 18.73

GC content: 37.58

Gene sequence:

>660_bases
ATGCTAGATTTTGACTTTATGCGCCAATGTGTGCCGATGTTTGCCAAAGCCCTCTCTTTGACTTTGTATATCTCCTTTTT
TGGCATTTTACTTTCACTTATCATTGGTTTCATAAGTGCGTGGATTTTGTTTTTAAAAGTCCGCTTTCTAAGCCCTATTG
TAGCAATCTATGTAGAATTAGCGCGTAACACACCCTTACTTATCCAACTCTTTTTTCTCTACTATGGGCTACATAGCATT
ATAGGCATAAATCTCAATGAATATGTCTGTGCTATCACAGGCTTAGCATTTTTAGGTGGTGGATATATGTGTGAGAGCTT
CCGCACAGGATTAGAATCTATCTCTAGCTCACAGATCGAAAGCGCACAAAGCATAGGATTACAATCTCATCAAATGATGT
TTTATATTATCCTCCCTCAATCTCTTAGTGTTGCTTTACCCTCTGTGGGAGCAAATGTCATTTTTCTTTTGAAAGAAACT
TCTGTTGTAAGTGTCATCGCTTTAGCAGATATTATGTTTGTAACCAAAGATATTATCACGCATTATTATAAAACAAATGA
AGCCTTAACTCTTCTTGTCTTAAGCTACCTCATCGTGCTTCTCCCTCTCTCTTTGGTCTTTTCACTCCTTGAGCGATCCT
ACAAAAAGCGAGTGTTGTAA

Upstream 100 bases:

>100_bases
ATAGCCGAGTATATCACCTTGAAGCTTTGTTTGTAATAAACTCGTCTATGAATTTAATAATTATCTATATAATGTCGCTT
TAAAATATCAAAGGGAGAAT

Downstream 100 bases:

>100_bases
TGGAAATATTTTTTATTGGCTCAAATTTTGCTCGGCTCTTACAAGGGGTGCTTCTCACGCTTGAGATTGCGCTCATCTCT
ATTATTTTAGCAACATTTGG

Product: glutamine ABC transporter permease GlnP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLDFDFMRQCVPMFAKALSLTLYISFFGILLSLIIGFISAWILFLKVRFLSPIVAIYVELARNTPLLIQLFFLYYGLHSI
IGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIESAQSIGLQSHQMMFYIILPQSLSVALPSVGANVIFLLKET
SVVSVIALADIMFVTKDIITHYYKTNEALTLLVLSYLIVLLPLSLVFSLLERSYKKRVL

Sequences:

>Translated_219_residues
MLDFDFMRQCVPMFAKALSLTLYISFFGILLSLIIGFISAWILFLKVRFLSPIVAIYVELARNTPLLIQLFFLYYGLHSI
IGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIESAQSIGLQSHQMMFYIILPQSLSVALPSVGANVIFLLKET
SVVSVIALADIMFVTKDIITHYYKTNEALTLLVLSYLIVLLPLSLVFSLLERSYKKRVL
>Mature_219_residues
MLDFDFMRQCVPMFAKALSLTLYISFFGILLSLIIGFISAWILFLKVRFLSPIVAIYVELARNTPLLIQLFFLYYGLHSI
IGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIESAQSIGLQSHQMMFYIILPQSLSVALPSVGANVIFLLKET
SVVSVIALADIMFVTKDIITHYYKTNEALTLLVLSYLIVLLPLSLVFSLLERSYKKRVL

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=33.0232558139535, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=26.1682242990654, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=26.7281105990783, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787087, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1788646, Length=167, Percent_Identity=28.7425149700599, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=25.2380952380952, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082239, Length=161, Percent_Identity=31.6770186335404, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786873, Length=225, Percent_Identity=27.1111111111111, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24551; Mature: 24551

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFDFMRQCVPMFAKALSLTLYISFFGILLSLIIGFISAWILFLKVRFLSPIVAIYVEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARNTPLLIQLFFLYYGLHSIIGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIE
HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SAQSIGLQSHQMMFYIILPQSLSVALPSVGANVIFLLKETSVVSVIALADIMFVTKDIIT
HHHHCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
HYYKTNEALTLLVLSYLIVLLPLSLVFSLLERSYKKRVL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDFDFMRQCVPMFAKALSLTLYISFFGILLSLIIGFISAWILFLKVRFLSPIVAIYVEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARNTPLLIQLFFLYYGLHSIIGINLNEYVCAITGLAFLGGGYMCESFRTGLESISSSQIE
HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SAQSIGLQSHQMMFYIILPQSLSVALPSVGANVIFLLKETSVVSVIALADIMFVTKDIIT
HHHHCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
HYYKTNEALTLLVLSYLIVLLPLSLVFSLLERSYKKRVL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA