| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265827
Identifier: 32265827
GI number: 32265827
Start: 326141
End: 326944
Strand: Direct
Name: 32265827
Synonym: HH0328
Alternate gene names: NA
Gene position: 326141-326944 (Clockwise)
Preceding gene: 32265826
Following gene: 32265828
Centisome position: 18.13
GC content: 38.31
Gene sequence:
>804_bases ATGAATCTCTTTGCTCTTAGTCTTGAAGCTCTCCACGCTCCAAGCATAGAATCTAAACTTGCTCTCCTTGAAGTAGTTGC ATCTCAAAAACATCTGCTCTGCGAGCAAATACTACATTCATCACATCATACACCATTTGCGTTGCAATCCCCCTCTTATG CGAGATTCTGTGAGATTATCCACCCAACTAAAATTCGCCGCCCAAAGCACATTAAAAGTAAAGAATCTTTCGCCAAAGTG CTACATTCTATTGTGCATATTGAATATAGTGCAATTGATTTAGCTCTTGATGCGCTCACGCGTTTTAAGAATCTGCCTCT ATTATATTATGAAGATTGGCTTGAAGTGGCATTACAAGAAGGATTACACTTTCGCCTTTTGCGAGAATGTCTCAATAAAC TTGGCTATGAGTATGGAGATTTTCCTGTGCATTCGCAGCTCTTTGATGCACAAGTAGCAACTCCTGATTTTAGCAATAGA ATGGCATTACTTCATAGAGGACTAGAAGCAAATGGGCTTGATGCAAATCCTTTTGTAGCGAGCAAAATAAAAGAGTTTGA GCATTCTATCACGCCTCAAGTGCTTGAAATTCTTGAAATCATTTTACACGATGAGATAGAACACGTTAAAAAAGGGGATA AATGGTGGAAATTCGCAAATAATAAAGTAAGTGCGTGCGATTTTGTTGCAATCCTCAAACGTTTTGAGGCTTTTAAAGCA ATTCCTAGAAATCTTCATTATGAGGCGAGACTAAAAGCAGGATTTTCACTTGAAGAGCTAGAAATAATCAAAGCAAATAG CTAG
Upstream 100 bases:
>100_bases AGCGAGACAATATGAGCTTTATTTCCACGGGTGGTGGAGCAAGTTTGGAGCTACTTGAAGGGAAAATTCTTCCTGCATTT GAGGTGCTTGAGCGCAAATA
Downstream 100 bases:
>100_bases TCTTATCCTAAATTTAAGTTTTAACACCCTATAATGCCTTTACGCAAAATTAAAGGGGTAAGAATGGAACTTTATATAAG ATTAAAGCTTATTTTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA IPRNLHYEARLKAGFSLEELEIIKANS
Sequences:
>Translated_267_residues MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA IPRNLHYEARLKAGFSLEELEIIKANS >Mature_267_residues MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA IPRNLHYEARLKAGFSLEELEIIKANS
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 30628; Mature: 30628
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEII CCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH HPTKIRRPKHIKSKESFAKVLHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQE CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH GLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNRMALLHRGLEANGLDANPFVA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHH SKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH IPRNLHYEARLKAGFSLEELEIIKANS HHHCCCHHHHHHCCCCHHHHHEEECCC >Mature Secondary Structure MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEII CCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH HPTKIRRPKHIKSKESFAKVLHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQE CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH GLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNRMALLHRGLEANGLDANPFVA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHH SKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH IPRNLHYEARLKAGFSLEELEIIKANS HHHCCCHHHHHHCCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]