| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265752
Identifier: 32265752
GI number: 32265752
Start: 246801
End: 247781
Strand: Direct
Name: 32265752
Synonym: HH0253
Alternate gene names: NA
Gene position: 246801-247781 (Clockwise)
Preceding gene: 32265751
Following gene: 32265764
Centisome position: 13.72
GC content: 32.62
Gene sequence:
>981_bases ATGGAGCAAATAGCAATTCTTGTAGAAGACATTGACAACCAAGCAAAACCGATTTATTGTGTTTTTGACGATAATGGAGG AACCATAGGCAATACTTCCATCAATCATTTGTGTTTGCCAGATGAATCTATTCAAGAAAGACATGTTAATATCAACTATG AAGATGGTTGCTTTACTATCTCTTGTATTGGGGATTCTGAAGTATTTTACAATGAATCTTTCTCTAAACTTGAGCAAGGC TATGAAACAATTATAGAAGTTGGGGATAGTTTTAGAATTGGAAAATATAAATGTAGCTTTATAGACACAAAAGATATAAA AGATGACTTCCTAGACTATAAAAAAGTGCTTGATAAAATTGCTGATGAAAGTGATTTTGCCATAGATGTTAAGCCTAGAG TGCAACTAGATACAAAAATATTAGATGAAGAAAATATGGCTGACAACTTAGATAAACATAAGATATTAGAAAAACTCTCT CCAGCACAAGTTATAAATACCATACCCTCCGATATAGCAAACACTCACGATACTATACAAAACATTATCACTTCATCGCA ATCAATGATAACAGATAGCATTTCTAAAAAAGAAATATCACCACAAACAAAGGAAAGTGATATTATCCTTCATACCAAGA ATATACAAACATTCCTACAAGGAATGCTACAATCTTTCTCTATGCCTAATAACCCCCTATCACACATCAATATGACAACT TATGAGCACATACTTGACACACAAGAGCTAGATTCTATCCTGCATAATACCTTGCTTATAGATTCTATCCCGCTTCTTAA CACTCTCATACTAGCCCTTATTAGCAAAGAACTCCATAGCCCATATTTTGAGATATTAGAACACGATATATTTGCAAACT CATTAACTCAAGCCATTATTCAATCTCATCAAAATAGTAAAGAATCCTTACAATGTATGCTTTTAAAGGCACTTAGCACA TACTTAAAGAATCCTCTTTAG
Upstream 100 bases:
>100_bases TTTTAGCATTACTCCAAATAGGCTAGAACTTTTACATTTAAGCCGTATTCTAACGCATTTTAATATGCCTCAACTTATCA CTCAACAATAAGGAACGCAA
Downstream 100 bases:
>100_bases ATTCTTAATACTTCCTCTTCTTTGCAAATTGAAAGTTTGAGGCTTTATGTATTTTGCATCTTTGTATGGCATTTATCAAT ACTTATCTTTTTATTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MEQIAILVEDIDNQAKPIYCVFDDNGGTIGNTSINHLCLPDESIQERHVNINYEDGCFTISCIGDSEVFYNESFSKLEQG YETIIEVGDSFRIGKYKCSFIDTKDIKDDFLDYKKVLDKIADESDFAIDVKPRVQLDTKILDEENMADNLDKHKILEKLS PAQVINTIPSDIANTHDTIQNIITSSQSMITDSISKKEISPQTKESDIILHTKNIQTFLQGMLQSFSMPNNPLSHINMTT YEHILDTQELDSILHNTLLIDSIPLLNTLILALISKELHSPYFEILEHDIFANSLTQAIIQSHQNSKESLQCMLLKALST YLKNPL
Sequences:
>Translated_326_residues MEQIAILVEDIDNQAKPIYCVFDDNGGTIGNTSINHLCLPDESIQERHVNINYEDGCFTISCIGDSEVFYNESFSKLEQG YETIIEVGDSFRIGKYKCSFIDTKDIKDDFLDYKKVLDKIADESDFAIDVKPRVQLDTKILDEENMADNLDKHKILEKLS PAQVINTIPSDIANTHDTIQNIITSSQSMITDSISKKEISPQTKESDIILHTKNIQTFLQGMLQSFSMPNNPLSHINMTT YEHILDTQELDSILHNTLLIDSIPLLNTLILALISKELHSPYFEILEHDIFANSLTQAIIQSHQNSKESLQCMLLKALST YLKNPL >Mature_326_residues MEQIAILVEDIDNQAKPIYCVFDDNGGTIGNTSINHLCLPDESIQERHVNINYEDGCFTISCIGDSEVFYNESFSKLEQG YETIIEVGDSFRIGKYKCSFIDTKDIKDDFLDYKKVLDKIADESDFAIDVKPRVQLDTKILDEENMADNLDKHKILEKLS PAQVINTIPSDIANTHDTIQNIITSSQSMITDSISKKEISPQTKESDIILHTKNIQTFLQGMLQSFSMPNNPLSHINMTT YEHILDTQELDSILHNTLLIDSIPLLNTLILALISKELHSPYFEILEHDIFANSLTQAIIQSHQNSKESLQCMLLKALST YLKNPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36931; Mature: 36931
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQIAILVEDIDNQAKPIYCVFDDNGGTIGNTSINHLCLPDESIQERHVNINYEDGCFTI CCHHEEEEECCCCCCCCEEEEEECCCCEECCCCCCEEECCCHHHHHCCCCCEECCCEEEE SCIGDSEVFYNESFSKLEQGYETIIEVGDSFRIGKYKCSFIDTKDIKDDFLDYKKVLDKI EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHH ADESDFAIDVKPRVQLDTKILDEENMADNLDKHKILEKLSPAQVINTIPSDIANTHDTIQ CCCCCCEEECCCCEEEHHHHHCCCCHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NIITSSQSMITDSISKKEISPQTKESDIILHTKNIQTFLQGMLQSFSMPNNPLSHINMTT HHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHCCHHH YEHILDTQELDSILHNTLLIDSIPLLNTLILALISKELHSPYFEILEHDIFANSLTQAII HHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QSHQNSKESLQCMLLKALSTYLKNPL HHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEQIAILVEDIDNQAKPIYCVFDDNGGTIGNTSINHLCLPDESIQERHVNINYEDGCFTI CCHHEEEEECCCCCCCCEEEEEECCCCEECCCCCCEEECCCHHHHHCCCCCEECCCEEEE SCIGDSEVFYNESFSKLEQGYETIIEVGDSFRIGKYKCSFIDTKDIKDDFLDYKKVLDKI EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHH ADESDFAIDVKPRVQLDTKILDEENMADNLDKHKILEKLSPAQVINTIPSDIANTHDTIQ CCCCCCEEECCCCEEEHHHHHCCCCHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NIITSSQSMITDSISKKEISPQTKESDIILHTKNIQTFLQGMLQSFSMPNNPLSHINMTT HHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHCCHHH YEHILDTQELDSILHNTLLIDSIPLLNTLILALISKELHSPYFEILEHDIFANSLTQAII HHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QSHQNSKESLQCMLLKALSTYLKNPL HHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA