| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265699
Identifier: 32265699
GI number: 32265699
Start: 193150
End: 193827
Strand: Direct
Name: 32265699
Synonym: HH0200
Alternate gene names: NA
Gene position: 193150-193827 (Clockwise)
Preceding gene: 32265698
Following gene: 32265700
Centisome position: 10.74
GC content: 32.01
Gene sequence:
>678_bases ATGGCGATTGGTAGAGTGATACACGAAAGTGGGACTTTATTCCCTGATTTTGATATGTTTGAGATTAATTATGAGCTTTT TGAAACAGATTGGGAAATGAAATTTTTTCTTAATATTCCCCATTTAACAAAAGTAGATATTTTAGAGTATTTTGAATGCT ATGTCGCAGCCTTTGGCACAGAAGAAGTGTATAGTGCTTTTTTTGCAGATTCCCCCTACAAACTAAACGAAACTCTCTTA GCCAACGACCCACAACCTAATTACATCAGCGAATACATTCACATTGTAGGACAATTATTCTTAGCAGGATATATTGAATT TGGAATGTGTGGTTTACAAGATAAAGAAGAAAATCTACTCTCTAATCAAAAAGAAGATAAATATCAAGCTTGGATTTATT TTAGAGATAATTTCTTTTATAAAAATGCCTATAATAGAGATATGGTAGAGGTGAGAGAAAAGTATCCAAATATGAGTGAT GATGAATATGTGTATTCCACTTATGACACACCACAATATTGGGATATGTATAGATTTTGGGTAGCCCAAACAGAGAAAGG CACAAAATACTTTAATGAAATCCTAGCTCCTAGATTCTATAACAAATACAAAGACTTAAGTGTTGAAATAGATTCAAAAG GCAATATTATAAGGTGGATTGGAAAGATTAATAGATAG
Upstream 100 bases:
>100_bases AAGGACTTAAGCGTAGAAATTGATGAGAAAGGAAATATAGTGCGTTGGATAGGAGCAATCAATAGATGAGGCATAAAAAT CCACAATAAGGCAGGAGAAA
Downstream 100 bases:
>100_bases AATGTCAATCAATCATTAGGATAAAAGATTTAAATTAGAATCAAAAATGTTAAAATATAAGTTTAGAAAACTATATTTAT TTATACTAAAAAGATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAIGRVIHESGTLFPDFDMFEINYELFETDWEMKFFLNIPHLTKVDILEYFECYVAAFGTEEVYSAFFADSPYKLNETLL ANDPQPNYISEYIHIVGQLFLAGYIEFGMCGLQDKEENLLSNQKEDKYQAWIYFRDNFFYKNAYNRDMVEVREKYPNMSD DEYVYSTYDTPQYWDMYRFWVAQTEKGTKYFNEILAPRFYNKYKDLSVEIDSKGNIIRWIGKINR
Sequences:
>Translated_225_residues MAIGRVIHESGTLFPDFDMFEINYELFETDWEMKFFLNIPHLTKVDILEYFECYVAAFGTEEVYSAFFADSPYKLNETLL ANDPQPNYISEYIHIVGQLFLAGYIEFGMCGLQDKEENLLSNQKEDKYQAWIYFRDNFFYKNAYNRDMVEVREKYPNMSD DEYVYSTYDTPQYWDMYRFWVAQTEKGTKYFNEILAPRFYNKYKDLSVEIDSKGNIIRWIGKINR >Mature_224_residues AIGRVIHESGTLFPDFDMFEINYELFETDWEMKFFLNIPHLTKVDILEYFECYVAAFGTEEVYSAFFADSPYKLNETLLA NDPQPNYISEYIHIVGQLFLAGYIEFGMCGLQDKEENLLSNQKEDKYQAWIYFRDNFFYKNAYNRDMVEVREKYPNMSDD EYVYSTYDTPQYWDMYRFWVAQTEKGTKYFNEILAPRFYNKYKDLSVEIDSKGNIIRWIGKINR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27089; Mature: 26957
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGRVIHESGTLFPDFDMFEINYELFETDWEMKFFLNIPHLTKVDILEYFECYVAAFGT CCCCCEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCH EEVYSAFFADSPYKLNETLLANDPQPNYISEYIHIVGQLFLAGYIEFGMCGLQDKEENLL HHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SNQKEDKYQAWIYFRDNFFYKNAYNRDMVEVREKYPNMSDDEYVYSTYDTPQYWDMYRFW CCCCCCCEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH VAQTEKGTKYFNEILAPRFYNKYKDLSVEIDSKGNIIRWIGKINR HHHCCCHHHHHHHHHCHHHHHCCCCEEEEECCCCCEEEEEECCCC >Mature Secondary Structure AIGRVIHESGTLFPDFDMFEINYELFETDWEMKFFLNIPHLTKVDILEYFECYVAAFGT CCCCEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCH EEVYSAFFADSPYKLNETLLANDPQPNYISEYIHIVGQLFLAGYIEFGMCGLQDKEENLL HHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SNQKEDKYQAWIYFRDNFFYKNAYNRDMVEVREKYPNMSDDEYVYSTYDTPQYWDMYRFW CCCCCCCEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH VAQTEKGTKYFNEILAPRFYNKYKDLSVEIDSKGNIIRWIGKINR HHHCCCHHHHHHHHHCHHHHHCCCCEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA