| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265596
Identifier: 32265596
GI number: 32265596
Start: 95714
End: 96115
Strand: Direct
Name: 32265596
Synonym: HH0097
Alternate gene names: NA
Gene position: 95714-96115 (Clockwise)
Preceding gene: 32265595
Following gene: 32265601
Centisome position: 5.32
GC content: 36.57
Gene sequence:
>402_bases ATGAATTATAAACTTCTCTCACTCCAAACCATAGGCGATGAACGCGGCAAATTAGTATCCTTAGAATCTCTTAAAAACTT GCCCTTTGCTATAAAAAGAGTGTATTATATGTTTGATACCTCGCCAGATTTGCCGCGAGGATTCCACGCTCACAAAGAGC TAGAACAACTTGTAATAGCTATAGATGGCGCGTGTGAGTTTGTGCTTGATGATGGAAAAAATAAAGAATCTGTATGGCTT AATCGCCCTGATGTTGGGTTGTATATTGGCAAAAATATGTGGCGAGAAATGCGGAACTTCTCTTATGGGTGTAAACTAAT GATACTTGCTAGTGATTATTATGATGAGAGTGAGTATATTAGAGATTATGCAGAGTTTTTAGATATAATAAAAAGGGTAT AA
Upstream 100 bases:
>100_bases TATTAATGATTATATGATGTATGCTCATAAAGTATGGGGGGGGGGGCATAAGATAAACCTTGTTATTCCCTTAAGTTTCA ATGTGGCTTAAGGTTACAAG
Downstream 100 bases:
>100_bases GAGCAAATCATAGACATTTTTTGAGATAAACGCTTCGGAGCTTTATTTTCTTTTATACTCACCCAGAAACACCAAATCAT TTGCCTCATTTCTAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Lipopolysaccharide Biosynthesis Protein; Bifunctional Acetyl Transferase/Isomerase; WxcM-Like; WblP Protein; WxcM Domain Protein Domain Protein; Polysaccharide Glycan Isomerase; Sugar Isomerase; FdtA-Like Protein; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Acetyl Transferase/Isomerase
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNYKLLSLQTIGDERGKLVSLESLKNLPFAIKRVYYMFDTSPDLPRGFHAHKELEQLVIAIDGACEFVLDDGKNKESVWL NRPDVGLYIGKNMWREMRNFSYGCKLMILASDYYDESEYIRDYAEFLDIIKRV
Sequences:
>Translated_133_residues MNYKLLSLQTIGDERGKLVSLESLKNLPFAIKRVYYMFDTSPDLPRGFHAHKELEQLVIAIDGACEFVLDDGKNKESVWL NRPDVGLYIGKNMWREMRNFSYGCKLMILASDYYDESEYIRDYAEFLDIIKRV >Mature_133_residues MNYKLLSLQTIGDERGKLVSLESLKNLPFAIKRVYYMFDTSPDLPRGFHAHKELEQLVIAIDGACEFVLDDGKNKESVWL NRPDVGLYIGKNMWREMRNFSYGCKLMILASDYYDESEYIRDYAEFLDIIKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15601; Mature: 15601
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKLLSLQTIGDERGKLVSLESLKNLPFAIKRVYYMFDTSPDLPRGFHAHKELEQLVIA CCEEEEEEEECCCCCCCEEEHHHHCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH IDGACEFVLDDGKNKESVWLNRPDVGLYIGKNMWREMRNFSYGCKLMILASDYYDESEYI CCCCEEEEECCCCCCCCEEECCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHH RDYAEFLDIIKRV HHHHHHHHHHHCC >Mature Secondary Structure MNYKLLSLQTIGDERGKLVSLESLKNLPFAIKRVYYMFDTSPDLPRGFHAHKELEQLVIA CCEEEEEEEECCCCCCCEEEHHHHCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH IDGACEFVLDDGKNKESVWLNRPDVGLYIGKNMWREMRNFSYGCKLMILASDYYDESEYI CCCCEEEEECCCCCCCCEEECCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHH RDYAEFLDIIKRV HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA