Click here to switch to the map view.

The map label for this gene is ytfK

Identifier: 30065491

GI number: 30065491

Start: 4440381

End: 4440626

Strand: Reverse

Name: ytfK

Synonym: S4534

Alternate gene names: 30065491

Gene position: 4440626-4440381 (Counterclockwise)

Preceding gene: 30065493

Following gene: 30065488

Centisome position: 96.55

GC content: 44.31

Gene sequence:

>246_bases
GTGGCACCGCACAGGCGTAATACTCAGCAGGAGATAACAATGAAAATTTTCCAACGGTACAACCCACTTCAGGTGGCGAA
GTACGTAAAGATCCTGTTCCGTGGACGGTTATACATCAAGGACATTGGCGCTTTTGAATTTGATAAGGGTAAGATTCTTA
TCCCAAAAGTGAAGGATAAGCTGCATTTGTCAGTGATGTCCGAAGTTAACCGTCAGGTTATGCGTCTGCAAACAGAGATG
GCTTAA

Upstream 100 bases:

>100_bases
AACCTTTAGGTAAAAAAAGTTATACGCGGTGGAAACATTGCCCGGATAGTCTATAGTCACTAAGCATTAAAATTTGCGCC
TCATAATAGTTGGGCCGATT

Downstream 100 bases:

>100_bases
CCAAAGTGCTATGCAGTAATAAGACGGCTCCTGATTCAGGAGCCGTTGATGTTTCTGGGGGTTACGCGACGCTTTCTTCT
TTATCTTTAGCGTCAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAPHRRNTQQEITMKIFQRYNPLQVAKYVKILFRGRLYIKDIGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEM
A

Sequences:

>Translated_81_residues
MAPHRRNTQQEITMKIFQRYNPLQVAKYVKILFRGRLYIKDIGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEM
A
>Mature_80_residues
APHRRNTQQEITMKIFQRYNPLQVAKYVKILFRGRLYIKDIGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082392, Length=68, Percent_Identity=98.5294117647059, Blast_Score=139, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009491
- ProDom:   PD055267 [H]

Pfam domain/function: PF06526 DUF1107 [H]

EC number: NA

Molecular weight: Translated: 9650; Mature: 9519

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPHRRNTQQEITMKIFQRYNPLQVAKYVKILFRGRLYIKDIGAFEFDKGKILIPKVKDK
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCCCCH
LHLSVMSEVNRQVMRLQTEMA
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APHRRNTQQEITMKIFQRYNPLQVAKYVKILFRGRLYIKDIGAFEFDKGKILIPKVKDK
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCCCCH
LHLSVMSEVNRQVMRLQTEMA
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]