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The map label for this gene is ytfT

Identifier: 30065482

GI number: 30065482

Start: 4427102

End: 4428127

Strand: Reverse

Name: ytfT

Synonym: S4523

Alternate gene names: 30065482

Gene position: 4428127-4427102 (Counterclockwise)

Preceding gene: 30065483

Following gene: 30065481

Centisome position: 96.28

GC content: 57.8

Gene sequence:

>1026_bases
GTGATGCCTCAATCTCTCCCTGACACTACGCCGCCAAAAAGGCGTTTTCACTGGCCGACGGGGATGCCGCAGCTGGCGGC
ACTGTTGCTGGTGCTGCTGGTCGATAGCCTGGTAGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCG
GTAGCCCTATCGACATTCTTAACCGTGCAGCTCCCGTTGCGTTACTGGCGATTGGTATTACGCTGGTGATCGCCACCGGT
GGTATCGATCTCTCTGTGGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCT
GCCGATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAA
TTCAGCCGTTTGTCGCCACCCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTC
ACGTTTAACTCGCCGGATCTCTCATGGTTTGGCAGCGGATCGCTGTTGTTCCTGCCAACGCCGGTCATTATCGCGGTGCT
GACGCTTCTCCTGTTCTGGCTGTTGACCCGCAAAACGGCGCTGGGGATGTTTATCGAAGTCGTTGGTATCAACATTCGGG
CGGCAAAAAATGCCGGGGTAAACACGCGAATCATCGTCATGCTCACCTACGTGTTGAGCGGGCTATGTGCGGCGATTGCG
GGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCCGGATTATGGCTGGAGCTGGACGCCATTCTCGC
GGTGGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTGCTCTCGGTAGTGGGGGCGCTGATTATTCAGG
GGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCGGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGTGTG
CTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCATGATAAAACGTAA

Upstream 100 bases:

>100_bases
GTGATCATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCACAGCTTTCCGTTCCGGCGATCATGAACGCCAT
TGCGGCGTAAGGAGAACAGT

Downstream 100 bases:

>100_bases
CTTGCCGCTGATGATCACCATCGGCGTCTTTGTGCTGGGCTATCTCTACTGCCTGACCCAGTTTCCCGGTTTTGCTTCCA
CAAGGGTGATCTGCAATATC

Product: putative transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMPQSLPDTTPPKRRFHWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGITLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEVVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT

Sequences:

>Translated_341_residues
MMPQSLPDTTPPKRRFHWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGITLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEVVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT
>Mature_341_residues
MMPQSLPDTTPPKRRFHWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGITLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEVVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=341, Percent_Identity=97.9472140762463, Blast_Score=572, Evalue=1e-164,
Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=36.5030674846626, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1790524, Length=244, Percent_Identity=32.3770491803279, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI145693152, Length=333, Percent_Identity=31.5315315315315, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787793, Length=274, Percent_Identity=34.6715328467153, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789992, Length=330, Percent_Identity=29.6969696969697, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082395, Length=252, Percent_Identity=34.5238095238095, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=27.3722627737226, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=29.8932384341637, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35600; Mature: 35600

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPQSLPDTTPPKRRFHWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGITLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECH
PVIIAVLTLLLFWLLTRKTALGMFIEVVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPQSLPDTTPPKRRFHWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGITLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECH
PVIIAVLTLLLFWLLTRKTALGMFIEVVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]