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The map label for this gene is fimI

Identifier: 30065430

GI number: 30065430

Start: 4372048

End: 4372686

Strand: Reverse

Name: fimI

Synonym: S4464

Alternate gene names: 30065430

Gene position: 4372686-4372048 (Counterclockwise)

Preceding gene: 30065431

Following gene: 30065429

Centisome position: 95.07

GC content: 49.92

Gene sequence:

>639_bases
ATGCGGATGCAACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAAGGACGTCATTACGGGCAGGGATGCCCACCC
TTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTGTTAGCGTCGTTGCTGCCAATGTTTGCTCTGGCCGGAA
ATAAATGGAATACCACGCTGCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGAAACTTGCCGGATTGAAGCC
GGTGATAAACAAATGACGGTCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGCAGGGGAAGATAGCGCACCGGT
GCCTTTTGTTATTCATTTACGGGAATGTAGCACGGTGGTGAGTGAACGTGTGGGTGTGGCGTTTCACGGTGTCGCGGATG
GTAAAAATCCGGATGTGCTCTCCGTGGGAGAGGGGCCAGGGATAGCCTCCAATATTGGTGTAGCGTTGTTTGATGATGAA
GGAAACCTCGTACCGATTAATCGTCCTCCAGCAAACTGGAAACGGCTTTACTCAGGCTCTACTTCGCTACATTTCATCGC
CAAATATCGTGCTACCGGGCGTCGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAA

Upstream 100 bases:

>100_bases
GCGACATTTAGTGCACAAACAACCCTGAATAACGGTACCAACACCATTCCGTTCCAGGCGCGTTATTATGCAATCGGCGA
GGCAACCCCGGGTGCAGCTA

Downstream 100 bases:

>100_bases
TTGTTCAGTAGATAATGTGATAACAGGAACAGGACAGTGAGTAATAAAAACGTCAATGTAAGGAAATCGCAGGAAATAAC
ATTCTGCTTGCTGGCAGGTA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRMQPSRFSINNLPRFKDVITGRDAHPCAIKITMKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEA
GDKQMTVNMGQISSNRFHAAGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIASNIGVALFDDE
GNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ

Sequences:

>Translated_212_residues
MRMQPSRFSINNLPRFKDVITGRDAHPCAIKITMKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEA
GDKQMTVNMGQISSNRFHAAGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIASNIGVALFDDE
GNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
>Mature_212_residues
MRMQPSRFSINNLPRFKDVITGRDAHPCAIKITMKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEA
GDKQMTVNMGQISSNRFHAAGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIASNIGVALFDDE
GNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=179, Percent_Identity=98.8826815642458, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI87081805, Length=174, Percent_Identity=32.183908045977, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790773, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87081753, Length=164, Percent_Identity=31.0975609756098, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1790769, Length=156, Percent_Identity=32.6923076923077, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787781, Length=151, Percent_Identity=29.8013245033113, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 23128; Mature: 23128

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMQPSRFSINNLPRFKDVITGRDAHPCAIKITMKRKRLFLLASLLPMFALAGNKWNTTL
CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
PGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAAGEDSAPVPFVIHLRECSTVV
CCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEEHHHHHHH
SERVGVAFHGVADGKNPDVLSVGEGPGIASNIGVALFDDEGNLVPINRPPANWKRLYSGS
HHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHCCC
TSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
CCEEEEEEECCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MRMQPSRFSINNLPRFKDVITGRDAHPCAIKITMKRKRLFLLASLLPMFALAGNKWNTTL
CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
PGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAAGEDSAPVPFVIHLRECSTVV
CCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEEHHHHHHH
SERVGVAFHGVADGKNPDVLSVGEGPGIASNIGVALFDDEGNLVPINRPPANWKRLYSGS
HHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHCCC
TSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
CCEEEEEEECCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 6147250 [H]