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The map label for this gene is yhgF

Identifier: 30065310

GI number: 30065310

Start: 4263684

End: 4265906

Strand: Reverse

Name: yhgF

Synonym: S4337

Alternate gene names: 30065310

Gene position: 4265906-4263684 (Counterclockwise)

Preceding gene: 161486379

Following gene: 30065309

Centisome position: 92.75

GC content: 56.77

Gene sequence:

>2223_bases
GTGCCGTTTATCGCACGTTATCGTAAGGAAATCACCGGCGGTCTGGATGACACGCAGCTGCGTAATCTGGAAACGCGTCT
GAGCTATCTGCGCGAGCTGGAAGAGAGACGTCAGGCGATCCTCAAATCCATTTCCGAGCAAGGCAAACTCACCGATGATC
TGGCGAAGGCCATCAACGCCACCCTAAGCAAAACCGAACTCGAAGACCTCTACCTGCCCTACAAACCTAAACGCCGCACC
CGCGGGCAAATCGCCATTGAAGCAGGGCTTGAGCCGTTGGCTGACCTGCTGTGGAGCGATCCGTCACACACGCCAGAAGT
CGCCGCTGCACAATATGTTGATGCCGATAAAGGCGTGGCAGATACCAAAGCCGCGCTGGATGGCGCGCGCTATATCCTGA
TGGAACGGTTTGCCGAAGATGCCGCGCTGCTGGCGAAAGTGCGTGATTATCTGTGGAAGAACGCGCATTTGGTTTCTACG
GTGGTGAGCGGTAAAGAAGAGGAAGGGGCGAAATTCCGCGACTATTTCGATCATCACGAACCGTTGTCCACGGTGCCTTC
TCACCGCGCGCTGGCGATGTTCCGTGGGCGTAACGAAGGCGTACTCCAGCTTTCGCTGAATGCCGATCCGCAGTTCGATG
AGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGC
TGGCGCAAAAGCGTAGTGAGCTGGACCTGGCGCATCAAGGTGCTGATGCATCTGGAAACCGAACTGATGGGTACCGTGCG
CGAACGCGCGGAAGATGAAGCAATCAACGTCTTTGCCCGTAACCTGCACGATCTGCTGATGGCGGCCCCTGCCGGACTGC
GTGCAACGATGGGCCTCGATCCGGGTCTGCGTACCGGGGTAAAAGTGGCGGTGGTCGATGCCACTGGCAAACTGGTGGCG
ACCGATACCATTTACCCGCACACCGGACAAGCCGCAAAAGCAGCGATGACCGTTGCTGCCTTGTGTGAAAAACATAACGT
TGAACTGGTGGCGATCGGCAACGGTACAGCTTCCCGCGAAACTGAACGTTTCTATCTCGACGTGCAGAAGCAGTTCCCGA
AAGTGACCGCACAGAAAGTGATCGTCAGCGAAGCTGGCGCGTCGGTTTACTCAGCTTCCGAGCTGGCAGCGCAGGAGTTC
CCGGATCTCGACGTTTCGCTGCGTGGTGCGGTATCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAAT
CGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGATGCAGTAG
TAGAAGACTGCGTAAACGCCGTTGGCGTCGATCTCAACACCGCTTCTGTTCCGCTATTAACCCGCGTGGCGGGCCTGACG
CGCATGATGGCGCAAAACATCGTGGCCTGGCGCGATGAGAACGGCCAGTTCCAGAACCGTCAGCAACTGCTGAAAGTCAG
CCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCCTGCGCATTAACCACGGTGATAACCCGCTGGACGCCTCTA
CCGTTCATCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAC
AGCAGCGAACTGCGTAACCTGAAAGCGTCTGACTTTACTGATGAAAAATTCGGTGTGCCGACAGTAACTGACATCATCAA
AGAGCTGGAAAAACCGGGTCGCGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACG
ACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCAT
CAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACAT
TGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGTCTGGACGAGCAGCCTGGCG
AAACCAACTCTCGTCGCGGCGGCGGTAATGAACGCCCGCAAAACAACCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCG
CAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCAGCGATGGGTAAAAAACGTTAA

Upstream 100 bases:

>100_bases
CATGATGAATGATTCGTTCTGCCGCATTATTGCGGGTGAAATTCAGGCGCGCCCGGAACAGGTTGACGCTGCCGTTCGCC
TGCTTGACGAAGGGAATACC

Downstream 100 bases:

>100_bases
ACGCCCGGACTGGCCCCTAAACCTGCGCGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCTTTGCCTGACATAAAAG
TGCCGGAGAATATCTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 740; Mature: 739

Protein sequence:

>740_residues
MPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRT
RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST
VVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS
WRKSVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA
TDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEF
PDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT
RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN
SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH
QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREA
QPAGNSAMMDALAAAMGKKR

Sequences:

>Translated_740_residues
MPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRT
RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST
VVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS
WRKSVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA
TDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEF
PDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT
RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN
SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH
QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREA
QPAGNSAMMDALAAAMGKKR
>Mature_739_residues
PFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTR
GQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV
VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSW
RKSVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVAT
DTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP
DLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTR
MMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS
SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ
DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREAQ
PAGNSAMMDALAAAMGKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=769, Percent_Identity=34.9804941482445, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=399, Percent_Identity=25.5639097744361, Blast_Score=96, Evalue=1e-19,
Organism=Escherichia coli, GI87082262, Length=740, Percent_Identity=99.4594594594595, Blast_Score=1513, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=82, Percent_Identity=43.9024390243902, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=705, Percent_Identity=27.6595744680851, Blast_Score=216, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17552892, Length=654, Percent_Identity=22.4770642201835, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.6375545851528, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI62484314, Length=763, Percent_Identity=31.8479685452163, Blast_Score=355, Evalue=5e-98,
Organism=Drosophila melanogaster, GI24640080, Length=414, Percent_Identity=23.4299516908213, Blast_Score=96, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 81505; Mature: 81373

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVA
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCH
DTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCC
PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS
CHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHH
WRKSVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
PGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE
CCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP
CHHHEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY
HHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHH
PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT
CCHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHH
VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREA
HEECCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPAGNSAMMDALAAAMGKKR
CCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVA
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCH
DTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCC
PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS
CHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHH
WRKSVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
PGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE
CCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP
CHHHEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY
HHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHH
PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT
CCHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHH
VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREA
HEECCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPAGNSAMMDALAAAMGKKR
CCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]