Click here to switch to the map view.

The map label for this gene is yhhN

Identifier: 30065255

GI number: 30065255

Start: 4197104

End: 4197730

Strand: Reverse

Name: yhhN

Synonym: S4277

Alternate gene names: 30065255

Gene position: 4197730-4197104 (Counterclockwise)

Preceding gene: 30065257

Following gene: 30065254

Centisome position: 91.27

GC content: 56.46

Gene sequence:

>627_bases
ATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCATGGCTATCTGTGGATGCATCGTATCGTGGGCCAACCTGGCAACG
CTGGGTGTTTAAACCGTTAACCCTTCTTCTCCTGCTGTTACTGGCCTGGCAAGCACCGATGTTCGACGCCATTAGCTATC
TGGTGCTGGCGGGACTGTGCGCCTCACTGCTGGGCGATGCGCTAACCCTGTTGCCACGTCAACGTCTGATGTACGCCATC
GGCGCGTTTTTCCTCTCGCACCTGCTGTACACCATCTATTTCGCCAGTCAGATGACGCTCTCTTTCTTCTGGCCTCTGCC
ACTGGTGTTGCTGGTTCTGGGTGCGCTGCTACTGGCGATTATCTGGACGCGGCTGGAAGAGTACCGTTGGCCTATCTGCA
CGTTTATCGGCATGACGCTGGTGATGGTGTGGCTGGCAGGTGAACTGTGGTTCTTCCGTCCGACCGCTCCGGCGCTCTCT
GCGTTTGTTGGCGCTTCGTTGCTGTTTATCAGTAACTTTGTCTGGCTGGGGAGCCACTATCGCCGACGCTTCCGTGCGGA
TAACGCGATTGCTGCGGCCTGCTACTTTGCCGGTCACTTCCTCATCGTCCGCTCACTGTATCTCTGA

Upstream 100 bases:

>100_bases
GCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCTGCTTACGAAAAAAT
AACGAATTCAAGGAACTAAG

Downstream 100 bases:

>100_bases
TAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGA
CACCTGACAATCACGGCAAG

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAI
GAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL

Sequences:

>Translated_208_residues
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAI
GAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
>Mature_208_residues
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAI
GAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family

Homologues:

Organism=Escherichia coli, GI1789878, Length=208, Percent_Identity=100, Blast_Score=406, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHHN_ECO57 (P0ADJ1)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E86014
- PIR:   E91168
- RefSeq:   NP_290016.1
- RefSeq:   NP_312344.1
- ProteinModelPortal:   P0ADJ1
- EnsemblBacteria:   EBESCT00000026284
- EnsemblBacteria:   EBESCT00000055868
- GeneID:   915828
- GeneID:   961270
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4842
- KEGG:   ecs:ECs4317
- GeneTree:   EBGT00050000009466
- HOGENOM:   HBG739675
- OMA:   FSGWLYV
- ProtClustDB:   CLSK880661
- BioCyc:   ECOL83334:ECS4317-MONOMER
- InterPro:   IPR012506

Pfam domain/function: PF07947 YhhN

EC number: NA

Molecular weight: Translated: 23791; Mature: 23791

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15737cec)-; HASH(0x16773dd4)-; HASH(0x166236cc)-; HASH(0x1326b504)-; HASH(0x163ff5cc)-; HASH(0x140d4060)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLC
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRRFRADNAIAAACYFAGHFLIVRSLYL
HHHHHCCHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLC
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRRFRADNAIAAACYFAGHFLIVRSLYL
HHHHHCCHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796